• 4244 Citations
  • 37 h-Index
1994 …2020

Research output per year

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Research Output

1994

Evaporation and condensation at a liquid methanol surface

Matsumoto, M., Yasuoka, K. & Kataoka, Y., 1994, In : Journal of Molecular Structure. 310, p. 161-168 8 p.

Research output: Contribution to journalArticle

2 Citations (Scopus)

Evaporation and condensation at a liquid methanol surface

Matsumoto, M., Yasuoka, K. & Kataoka, Y., 1994, In : Journal of Molecular Structure: THEOCHEM. 310, p. 161-168 8 p.

Research output: Contribution to journalArticle

Evaporation and condensation at a liquid surface. I. Argon

Yasuoka, K., Matsumoto, M. & Kataoka, Y., 1994 Jan 1, In : The Journal of Chemical Physics. 101, 9, p. 7904-7911 8 p.

Research output: Contribution to journalArticle

89 Citations (Scopus)

Evaporation and condensation at a liquid surface. II. Methanol

Matsumoto, M., Yasuoka, K. & Kataoka, Y., 1994 Jan 1, In : The Journal of Chemical Physics. 101, 9, p. 7912-7917 6 p.

Research output: Contribution to journalArticle

66 Citations (Scopus)
1995

Dynamics near a liquid surface: Mechanisms of evaporation and condensation

Yasuoka, K., Matsumoto, M. & Kataoka, Y., 1995 Nov, In : Journal of Molecular Liquids. 65-66, C, p. 329-332 4 p.

Research output: Contribution to journalArticle

11 Citations (Scopus)

Dynamics near a Liquid Surface: Mechanisms of Evaporation and Condensation

Yasuoka, K., Matsumoto, M. & Kataoka, Y., 1995 Jan 1, In : Studies in Physical and Theoretical Chemistry. 83, C, p. 329-332 4 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Molecular simulation of evaporation and condensation

Matsumoto, M., Yasuoka, K. & Kataoka, Y., 1995 Mar 1, In : Fluid Phase Equilibria. 104, C, p. 431-439 9 p.

Research output: Contribution to journalArticle

23 Citations (Scopus)
1998

Molecular dynamics of homogeneous nucleation in the vapor phase. I. Lennard-Jones fluid

Yasuoka, K. & Matsumoto, M., 1998 Dec 1, In : Journal of Chemical Physics. 109, 19, p. 8451-8462 12 p.

Research output: Contribution to journalArticle

234 Citations (Scopus)

Molecular dynamics of homogeneous nucleation in the vapor phase. II. Water

Yasuoka, K. & Matsumoto, M., 1998 Dec 1, In : Journal of Chemical Physics. 109, 19, p. 8463-8470 8 p.

Research output: Contribution to journalArticle

116 Citations (Scopus)

Molecular dynamics simulation of homogeneous nucleation in supersaturated water vapor

Yasuoka, K. & Matsumoto, M., 1998 Dec 1, In : Fluid Phase Equilibria. 144, 1-2, p. 369-376 8 p.

Research output: Contribution to journalArticle

15 Citations (Scopus)
5 Citations (Scopus)
1999

Computer simulation of fluid phase change: Vapor nucleation and bubble formation dynamics

Kinjo, T., Ohguchi, K., Yasuoka, K. & Matsumoto, M., 1999 Feb, In : Computational Materials Science. 14, 1-4, p. 138-141 4 p.

Research output: Contribution to journalArticle

28 Citations (Scopus)
2000

A Smooth-Particle Mesh Ewald Method for DL_POLY Molecular Dynamics Simulation Package on the Fujitsu VPP700

Kholmurodov, K., Smith, W., Yasuoka, K., Darden, T. & Ebisuzaki, T., 2000 Jan 1, In : Journal of Computational Chemistry. 21, 13, p. 1187-1191 5 p.

Research output: Contribution to journalArticle

41 Citations (Scopus)

Highly vectorized `link-cell' FORTRAN code for the DL_POLY molecular dynamics simulation package

Kholmurodov, K., Smith, W., Yasuoka, K. & Ebisuzaki, T., 2000 Mar, In : Computer Physics Communications. 125, 1, p. 167-192 26 p.

Research output: Contribution to journalArticle

11 Citations (Scopus)

Molecular dynamics simulation of dissociation process for methane hydrate

Yasuoka, K. & Murakoshi, S., 2000, In : Annals of the New York Academy of Sciences. 912, p. 678-684 7 p.

Research output: Contribution to journalArticle

21 Citations (Scopus)

Molecular dynamics simulation of supersaturated vapor nucleation in slit pore

Yasuoka, K., Gao, G. T. & Zeng, X. C., 2000 Mar 1, In : Journal of Chemical Physics. 112, 9, p. 4279-4285 7 p.

Research output: Contribution to journalArticle

51 Citations (Scopus)

Molecular dynamics simulation of the homogeneous nucleation of UF6 molecules: Configurations and infrared spectra of the excited hot clusters

Tanimura, S., Yasuoka, K. & Ebisuzaki, T., 2000 Feb 22, In : Journal of Chemical Physics. 112, 8, p. 3812-3819 8 p.

Research output: Contribution to journalArticle

8 Citations (Scopus)

Molecular mechanism of vapor-liquid nucleation

Ohguchi, K., Yasuoka, K. & Matsumoto, M., 2000 Jan 1, In : Progress of Theoretical Physics Supplement. 138, p. 257-258 2 p.

Research output: Contribution to journalArticle

Open Access
4 Citations (Scopus)
2001

MD simulation of cluster-surface impacts for metallic phases: Soft landing, droplet spreading and implantation

Kholmurodov, K., Puzynin, I., Smith, W., Yasuoka, K. & Ebisuzaki, T., 2001 Nov 15, In : Computer Physics Communications. 141, 1, p. 1-16 16 p.

Research output: Contribution to journalArticle

13 Citations (Scopus)

Molecular dynamics simulation of supersaturated vapor nucleation in slit pore. II. Thermostatted atomic-wall model

Kholmurodov, K. T., Yasuoka, K. & Zeng, X. C., 2001 Jun 1, In : Journal of Chemical Physics. 114, 21, p. 9578-9584 7 p.

Research output: Contribution to journalArticle

22 Citations (Scopus)
2002

Microscopic study of nuclear "Pasta" by quantum molecular dynamics

Watanabe, G., Sato, K., Yasuoka, K. & Ebisuzaki, T., 2002, In : Progress of Theoretical Physics. 146 SUPPL., p. 638-639 2 p.

Research output: Contribution to journalArticle

Open Access

Microscopic study of slablike and rodlike nuclei: Quantum molecular dynamics approach

Watanabe, G., Sato, K., Yasuoka, K. & Ebisuzaki, T., 2002 Jul 1, In : Physical Review C - Nuclear Physics. 66, 1, p. 128011-128015 5 p., 012801.

Research output: Contribution to journalArticle

63 Citations (Scopus)

Molecular Dynamics Simulation of Cluster-Beam-Surface Impact Processes for Metallic Phases

Kholmurodov, K., Puzynin, I., Smith, W., Yasuoka, K. & Ebisuzaki, T., 2002 Jan 1, In : Journal of Computational Methods in Sciences and Engineering. 2, 1-2, p. 141-147 7 p.

Research output: Contribution to journalArticle

3 Citations (Scopus)

Molecular dynamics study of the solidification process in alkali halide cluster

Koishi, T., Yasuoka, K., Narumi, T., Susukita, R., Furusawa, H. & Ebisuzaki, T., 2002 Oct 1, In : Journal of Non-Crystalline Solids. 312-314, p. 332-336 5 p.

Research output: Contribution to journalArticle

3 Citations (Scopus)

Numerical simulations of magnetic materials with MD-GRAPE: Curvature induced anisotropy

Elmegreen, B. G., Koch, R., Yasuoka, K., Furusawa, H., Narumi, T., Susukita, R. & Ebisuzaki, T., 2002 Sep 1, In : Journal of Magnetism and Magnetic Materials. 250, p. 39-48 10 p.

Research output: Contribution to journalArticle

5 Citations (Scopus)
2003

Hardware accelerator for molecular dynamics: MDGRAPE-2

Susukita, R., Ebisuzaki, T., Elmegreen, B. G., Furusawa, H., Kato, K., Kawai, A., Kobayashi, Y., Koishi, T., McNiven, G. D., Narumi, T. & Yasuoka, K., 2003 Oct 1, In : Computer Physics Communications. 155, 2, p. 115-131 17 p.

Research output: Contribution to journalArticle

54 Citations (Scopus)

Large scale molecular dynamics simulation of nucleation in supercooled NaCl

Koishi, T., Yasuoka, K. & Ebisuzaki, T., 2003 Dec 1, In : Journal of Chemical Physics. 119, 21, p. 11298-11305 8 p.

Research output: Contribution to journalArticle

26 Citations (Scopus)

Microscopic study of nuclear "pasta": Quantum molecular dynamics approach

Watanabe, G., Sato, K., Yasuoka, K. & Ebisuzaki, T., 2003 Jul 28, In : Nuclear Physics A. 723, 1-2, p. 700c-702c

Research output: Contribution to journalArticle

Molecular dynamics study on class A β-lactamase: Hydrogen bond network among the functional groups of penicillin G and side chains of the conserved residues in the active site

Fujii, Y., Okimoto, N., Hata, M., Narumi, T., Yasuoka, K., Susukita, R., Suenaga, A., Futatsugi, N., Koishi, T., Furusawa, H., Kawai, A., Ebisuzaki, T., Neya, S. & Hoshino, T., 2003 Sep 18, In : Journal of Physical Chemistry B. 107, 37, p. 10274-10283 10 p.

Research output: Contribution to journalArticle

19 Citations (Scopus)
113 Citations (Scopus)

Structure of cold nuclear matter at subnuclear densities by quantum molecular dynamics

Watanabe, G., Sato, K., Yasuoka, K. & Ebisuzaki, T., 2003 Sep, In : Physical Review C - Nuclear Physics. 68, 3, p. 358061-3580620 3222560 p., 035806.

Research output: Contribution to journalArticle

68 Citations (Scopus)

Structure of cold nuclear matter at subnuclear densities by quantum molecular dynamics

Watanabe, G., Sato, K., Yasuoka, K. & Ebisuzaki, T., 2003 Jan 1, In : Physical Review C - Nuclear Physics. 68, 3, 1 p.

Research output: Contribution to journalArticle

11 Citations (Scopus)
2004

Nanoscale hydrophobic interaction and nanobubble nucleation

Koishi, T., Yoo, S., Yasuoka, K., Zeng, X. C., Narumi, T., Susukita, R., Kawai, A., Furusawa, H., Suenaga, A., Okimoto, N., Futatsugi, N. & Ebisuzaki, T., 2004 Oct 29, In : Physical review letters. 93, 18, p. 185701-1-185701-4 185701.

Research output: Contribution to journalArticle

84 Citations (Scopus)

Phases of hot nuclear matter at subnuclear densities

Watanabe, G., Sato, K., Yasuoka, K. & Ebisuzaki, T., 2004 May, In : Physical Review C - Nuclear Physics. 69, 5, p. 055805-1-055805-14 055805.

Research output: Contribution to journalArticle

55 Citations (Scopus)

Simulations of magnetic materials with MDGRAPE-2

Elmegreen, B. G., Koch, R. H., Schabes, M. E., Crawford, T., Ebisuzaki, T., Furusawa, H., Narumi, T., Susukita, R. & Yasuoka, K., 2004 Mar, In : IBM Journal of Research and Development. 48, 2, p. 199-207 9 p.

Research output: Contribution to journalArticle

2 Citations (Scopus)

Tyr-317 Phosphorylation Increases Shc Structural Rigidity and Reduces Coupling of Domain Motions Remote from the Phosphorylation Site as Revealed by Molecular Dynamics Simulations

Suenaga, A., Kiyatkin, A. B., Hatakeyama, M., Futatsugi, N., Okimoto, N., Hirano, Y., Narumi, T., Kawai, A., Susukita, R., Koishi, T., Furusawa, H., Yasuoka, K., Takada, N., Ohno, Y., Taiji, M., Ebisuzaki, T., Hoek, J. B., Konagaya, A. & Kholodenko, B. N., 2004 Feb 6, In : Journal of Biological Chemistry. 279, 6, p. 4657-4662 6 p.

Research output: Contribution to journalArticle

27 Citations (Scopus)
2005

Large-scale molecular-dynamics simulation of nanoscale hydrophobic interaction and nanobubble formation

Koishi, T., Yasuoka, K., Ebisuzaki, T., Yoo, S. & Zeng, X. C., 2005, In : Journal of Chemical Physics. 123, 20, 204707.

Research output: Contribution to journalArticle

47 Citations (Scopus)

Simulation of transitions between "pasta" phases in dense matter

Watanabe, G., Maruyama, T., Sato, K., Yasuoka, K. & Ebisuzaki, T., 2005 Jan 28, In : Physical review letters. 94, 3, 031101.

Research output: Contribution to journalArticle

87 Citations (Scopus)

Thermodynamic simulations of isobaric hydrate-forming operations: Formulation of computational scheme and its application to hydrate formation from a methane + ethane + propane mixture

Tsuji, H., Kobayashi, T., Okano, Y., Ohmura, R., Yasuoka, K. & Mori, Y. H., 2005 Jul 1, In : Energy and Fuels. 19, 4, p. 1587-1597 11 p.

Research output: Contribution to journalArticle

21 Citations (Scopus)

Two-dimensional supercritical behavior of an ethanol monolayer: A molecular dynamics study

Andoh, Y. & Yasuoka, K., 2005 Nov 8, In : Langmuir. 21, 23, p. 10885-10894 10 p.

Research output: Contribution to journalArticle

5 Citations (Scopus)
2006

Free-energy calculation of structure-H hydrates

Okano, Y. & Yasuoka, K., 2006 Jan 23, In : Journal of Chemical Physics. 124, 2, 024510.

Research output: Contribution to journalArticle

43 Citations (Scopus)

Hydrogen-bonded clusters on the vapor/ethanol-aqueous-solution interface

Andoh, Y. & Yasuoka, K., 2006 Nov 23, In : Journal of Physical Chemistry B. 110, 46, p. 23264-23273 10 p.

Research output: Contribution to journalArticle

20 Citations (Scopus)
2007

Anisotropic molecular clustering in liquid ethanol induced by a charged fully hydroxylated silicon dioxide (SiO2) surface

Andoh, Y., Kurahashi, K., Sakuma, H., Yasuoka, K. & Kurihara, K., 2007 Nov 14, In : Chemical Physics Letters. 448, 4-6, p. 253-257 5 p.

Research output: Contribution to journalArticle

11 Citations (Scopus)

Cutoff radius effect of isotropic periodic sum method for transport coefficients of Lennard-Jones liquid

Takahashi, K., Yasuoka, K. & Narumi, T., 2007 Sep 28, In : Journal of Chemical Physics. 127, 11, 114511.

Research output: Contribution to journalArticle

22 Citations (Scopus)

Extended study of molecular dynamics simulation of homogeneous vapor-liquid nucleation of water

Matsubara, H., Koishi, T., Ebisuzaki, T. & Yasuoka, K., 2007 Dec 14, In : Journal of Chemical Physics. 127, 21, 214507.

Research output: Contribution to journalArticle

39 Citations (Scopus)

Fast vortex method calculation using a special-purpose computer

Sheel, T. K., Yasuoka, K. & Obi, S., 2007 Sep 1, In : Computers and Fluids. 36, 8, p. 1319-1326 8 p.

Research output: Contribution to journalArticle

8 Citations (Scopus)

Impact of nuclear "pasta" on neutrino transport in collapsing stellar cores

Sonoda, H., Watanabe, G., Sato, K., Takiwaki, T., Yasuoka, K. & Ebisuzaki, T., 2007 Apr 6, In : Physical Review C - Nuclear Physics. 75, 4, 042801.

Research output: Contribution to journalArticle

45 Citations (Scopus)
30 Citations (Scopus)

Molecular dynamics simulation of time-irreversibility of stationary heat flux

Mima, T., Yasuoka, K. & Nosé, S., 2007 Jan 1, In : Molecular Simulation. 33, 1-2, p. 109-113 5 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Molecular dynamics simulations of structure-H hydrates formed with methane and 3,3-dimethylpentane or 2,2-dimethylpentane

Miyoshi, T., Ohmura, R. & Yasuoka, K., 2007 Jan 1, In : Molecular Simulation. 33, 1-2, p. 65-69 5 p.

Research output: Contribution to journalArticle

5 Citations (Scopus)