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Research Output 1994 2019

  • 3917 Citations
  • 36 h-Index
  • 195 Article
  • 13 Conference contribution
  • 8 Chapter
  • 1 Conference article
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2019

Molecular Dynamic Simulations to Probe Water Permeation Pathways of GPCRs

Tomobe, K., Yamamoto, E. & Yasuoka, K., 2019 Jan 1, Methods in Molecular Biology. Humana Press Inc., p. 21-30 10 p. (Methods in Molecular Biology; vol. 1947).

Research output: Chapter in Book/Report/Conference proceedingChapter

Molecular Dynamics Simulation
Rhodopsin
Water
G-Protein-Coupled Receptors
Signal Transduction
2013

MD simulations on the structure of onco-proteins p53: Wild-type and radioresistant mutant systems

Kholmurodov, K. T., Krasavin, E. A., Krylov, V. A., Dushanov, E. B., Korenkov, V. V., Yasuoka, K., Narumi, T., Ohno, Y., Taiji, M. & Ebisuzaki, T., 2013 Jan, Molecular Dynamics of Nanobiostructures. Nova Science Publishers, Inc., p. 179-208 30 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Molecular dynamics
DNA
deoxyribonucleic acid
molecular dynamics
proteins

MD studies of the structural and diffusion properties of formamide/water and ethanol/water mixtures on titanium and platinum surfaces

Dushanov, E., Kholmurodov, K., Yasuoka, K. & Krasavin, E., 2013, Models in Bioscience and Materials Research: Molecular Dynamics and Related Techniques. Nova Science Publishers, Inc., p. 13-34 22 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Molecular Dynamics Simulation
Titanium
Platinum
Molecular dynamics
Ethanol

Molecular dynamics simulation of water adsorbed on ice nucleation protein

Murakami, D. & Yasuoka, K., 2013 Jan, Molecular Dynamics of Nanobiostructures. Nova Science Publishers, Inc., p. 163-177 15 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Ice
Molecular dynamics
ice
Nucleation
nucleation
3 Citations (Scopus)

Molecular dynamics simulations of the DNA interaction with metallic nanoparticles and TiO2 surfaces

Kholmurodov, K. T., Dushanov, E. B., Krasavin, E. A., Hassan, H. K., ElHabashy, H. A., Galal, A., Sweilam, N. H. & Yasuoka, K., 2013, Models in Bioscience and Materials Research: Molecular Dynamics and Related Techniques. Nova Science Publishers, Inc., p. 167-200 34 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Metal Nanoparticles
Molecular Dynamics Simulation
Molecular dynamics
Nanoparticles
DNA
2012

MD simulations on the structure of onco-proteins P53: Wild-type and radioresistant mutant systems

Kholmurodov, K. T., Krasavin, E. A., Krylov, V. A., Dushanov, E. B., Korenkov, V. V., Yasuoka, K., Narumi, T., Ohno, Y., Taiji, M. & Ebisuzaki, T., 2012 Jan 1, Molecular Dynamics of Nanobiostructures. Nova Science Publishers, Inc., p. 179-208 30 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Molecular dynamics
DNA
Proteins
Computer simulation
Dimers

Molecular dynamics simulation of water adsorbed on ice nucleation protein

Murakami, D. & Yasuoka, K., 2012 Jan 1, Molecular Dynamics of Nanobiostructures. Nova Science Publishers, Inc., p. 163-177 15 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Ice
Molecular dynamics
Nucleation
Proteins
Computer simulation
2009

Using special-Purpose and video-game computers for accelerating molecular dynamics simulations

Narumi, T., Sakamaki, R., Kameoka, S. & Yasuoka, K., 2009, Molecular Simulation in Material and Biological Research. Nova Science Publishers, Inc., p. 29-40 12 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Video Games
Computer games
Molecular Dynamics Simulation
Molecular dynamics
Computer simulation