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2019

Complete genome sequence of halomonas olivaria, a moderately halophilic bacterium isolated from olive processing effluents, obtained by nanopore sequencing

Nagata, S., Ii, K. M., Tsukimi, T., Miura, M. C., Galipon, J. & Arakawa, K., 2019 May 2, In : Microbiology Resource Announcements. 8, 18, e00144-19.

Research output: Contribution to journal › Article

Open Access
Halomonas
Nanopores
Olea
Genome
Bacteria

Complete genome sequence of halomonas sulfidaeris strain esulfide1 isolated from a metal sulfide rock at a depth of 2,200 meters, obtained using nanopore sequencing

Saito, M., Nishigata, A., Galipon, J. & Arakawa, K., 2019 Jun 6, In : Microbiology Resource Announcements. 8, 23, e0032719.

Research output: Contribution to journal › Article

Open Access
Halomonas
Nanopores
Sulfides
Metals
Genome

Complete genome sequence of halophilic deep-sea bacterium halomonas axialensis strain Althf1

Tsurumaki, M., Deno, S., Galipon, J. & Arakawa, K., 2019 Aug 1, In : Microbiology Resource Announcements. 8, 31, e00839-19.

Research output: Contribution to journal › Article

Open Access
Halomonas
Hydrothermal Vents
Oceans and Seas
Nanopores
Genome

Complete genome sequence of Psychrobacter sp. Strain KH172YL61, isolated from deep-sea sediments in the Nankai Trough, Japan

Evans-Yamamoto, D., Takeuchi, N., Masuda, T., Murai, Y., Onuma, Y., Mori, H., Masuyama, N., Ishiguro, S., Yachie, N. & Arakawa, K., 2019 Apr 18, In : Microbiology Resource Announcements. 8, 16, e00326-19.

Research output: Contribution to journal › Article

Open Access
Psychrobacter
Genome Size
Base Composition
Gram-Negative Bacteria
Oceans and Seas

Complete genome sequences of staphylococcus argenteus TWCC 58113, which bears two plasmids

Miyoshi-Akiyama, T., Ohnishi, T., Shinjo(H), M., Ohara, H., Kawai, T., Kamimaki, I., Mizushima, R., Kamada, K., Itakura, Y., Iguchi, S., Uzawa, Y., Yoshida, A., Kikuchi, K. & Takemoto, N., 2019 Apr 25, In : Microbiology Resource Announcements. 8, 17, e01582-18.

Research output: Contribution to journal › Article

Open Access
Lymphadenitis
Chromosomes, Human, Pair 2
Base Composition
Staphylococcus
Plasmids

Complete response with early introduction of cabazitaxel in a patient with multiple lung metastases of castration-resistant prostate cancer following the early detection of metastases using liquid biopsy: A case report

Kosaka, T., Hongo, H. & Oya, M., 2019 Jun 11, In : BMC Cancer. 19, 1, 562.

Research output: Contribution to journal › Article

Open Access
Castration
docetaxel
Prostatic Neoplasms
Neoplasm Metastasis
Circulating Neoplastic Cells

Complete self-recovery of photoluminescence of photodegraded cesium lead bromide quantum dots

Kidokoro, K., Iso, Y. & Isobe, T., 2019 Jan 1, In : Journal of Materials Chemistry C. 7, 28, p. 8546-8550 5 p.

Research output: Contribution to journal › Article

Open Access
Cesium
Semiconductor quantum dots
Photoluminescence
Lead
Ligands

Comprehensive genetic analysis of cholangiolocellular carcinoma with a coexistent hepatocellular carcinoma-like area and metachronous hepatocellular carcinoma

Kawai-Kitahata, F., Asahina, Y., Kaneko, S., Tsuchiya, J., Sato, A., Miyoshi, M., Tsunoda, T., Inoue-Shinomiya, E., Murakawa, M., Nitta, S., Itsui, Y., Nakagawa, M., Azuma, S., Kakinuma, S., Tanabe, M., Sugawara, E., Takemoto, A., Ojima, H., Sakamoto, M., Muraoka, M. & 4 others, Takano, S., Maekawa, S., Enomoto, N. & Watanabe, M., 2019 Jan 1, (Accepted/In press) In : Hepatology Research.

Research output: Contribution to journal › Article

Hepatocellular Carcinoma
Carcinoma
Mutation
Phosphotransferases
Laser Capture Microdissection

Comprehensive validation of liquid-based cytology specimens for next-generation sequencing in cancer genome analysis

Akahane, T., Yamaguchi, T., Kato, Y., Yokoyama, S., Hamada, T., Nishida, Y., Higashi, M., Nishihara, H., Suzuki, S., Ueno, S. & Tanimoto, A., 2019 Jun 1, In : PloS one. 14, 6, e0217724.

Research output: Contribution to journal › Article

Open Access
Cytology
cell biology
Cell Biology
Genes
Genome

Computational and statistical analyses for robust non-convex sparse regularized regression problem

Katayama, S., 2019 Jul 1, In : Journal of Statistical Planning and Inference. 201, p. 20-31 12 p.

Research output: Contribution to journal › Article

Random errors
Linear regression
Outlier
Regression
Estimator

Computed tomography-guided percutaneous cryoablation for recurrent sacral chordoma following carbon ion radiotherapy: A case report

Inaba, N., Nakayama, T. R., Mori, T., Hosaka, S., Susa, M., Yabe, H., Inoue, M., Nakatsuka, S., Nakamura, M., Matsumoto, M., Toyama, Y. & Morioka, H., 2019 Mar 1, In : Journal of Orthopaedic Science. 24, 2, p. 368-372 5 p.

Research output: Contribution to journal › Article

Heavy Ion Radiotherapy
Chordoma
Cryosurgery
Tomography

Computing exact score vectors for linear Gaussian state space models

Nagakura, D., 2019 Jan 1, In : Communications in Statistics: Simulation and Computation.

Research output: Contribution to journal › Article

Gaussian Model
State-space Model
Computing
Covariance matrix
MATLAB

Concerns and Side Effects of Azathioprine During Adalimumab Induction and Maintenance Therapy for Japanese Patients With Crohn's Disease: A Subanalysis of a Prospective Randomised Clinical Trial [DIAMOND Study

DIAMOND study group, 2019 Sep 19, In : Journal of Crohn's & colitis. 13, 9, p. 1097-1104 8 p.

Research output: Contribution to journal › Article

Azathioprine
Crohn Disease
Randomized Controlled Trials
Kaplan-Meier Estimate
Therapeutics

Concise Review: Genetic and Epigenetic Regulation of Cardiac Differentiation from Human Pluripotent Stem Cells

Fujita, J., Tohyama, S., Kishino, Y., Okada, M. & Morita, Y., 2019 Jan 1, In : Stem Cells.

Research output: Contribution to journal › Review article

Open Access
Pluripotent Stem Cells
Epigenomics
Cardiac Myocytes
Transcription Factors
Histone Code

Concurrent positive anti-3-hydroxy-3-methylglutaryl-coenzyme a reductase antibody with reducing body myopathy: Possible double trouble

Tanboon, J., Sanmaneechai, O., Charuvanij, S., Sangruchi, T., Galindo-Feria, A. S., Lundberg, I. E., Ohnuki, Y., Shiina, T., Suzuki, S. & Nishino, I., 2019 Jan 1, In : Neuromuscular Disorders.

Research output: Contribution to journal › Article

Coenzymes
Muscular Diseases
Oxidoreductases
Antibodies
Immunotherapy
2 Citations (Scopus)

Concurrent validity and measurement error of stair climb test in people with pre-radiographic to mild knee osteoarthritis

Iijima, H., Shimoura, K., Eguchi, R., Aoyama, T. & Takahashi, M., 2019 Feb 1, In : Gait and Posture. 68, p. 335-339 5 p.

Research output: Contribution to journal › Article

Knee Osteoarthritis
Reproducibility of Results
Mobility Limitation
Confidence Intervals
Shoes
26 Citations (Scopus)

Conductive diamond: Synthesis, properties, and electrochemical applications

Yang, N., Yu, S., MacPherson, J. V., Einaga, Y., Zhao, H., Zhao, G., Swain, G. M. & Jiang, X., 2019 Jan 7, In : Chemical Society Reviews. 48, 1, p. 157-204 48 p.

Research output: Contribution to journal › Review article

Diamond
Electrocatalysis
Electrodes
Weathering
Energy storage
1 Citation (Scopus)

Conformal field theory analysis of the QCD Kondo effect

Kimura, T. & Ozaki, S., 2019 Jan 1, In : Physical Review D. 99, 1, 014040.

Research output: Contribution to journal › Article

Kondo effect
quantum chromodynamics
magnetic fields
boundary conditions
impurities

Congenital nail clubbing

Nakazawa, S., Niizeki, H., Nakabayashi, K., Tanese, K. & Tokura, Y., 2019 Mar 1, In : Journal of Dermatology. 46, 3, p. e101-e102

Research output: Contribution to journal › Letter

Nails

Connecting mechanism for artificial blood vessels with high biocompatibility

Watanabe, A. & Miki, N., 2019 Jul 1, In : Micromachines. 10, 7, 429.

Research output: Contribution to journal › Article

Open Access
Blood vessel prostheses
Biocompatibility
Blood
Hemodynamics
Coagulation
2 Citations (Scopus)

Construction of Continuous Capillary Networks Stabilized by Pericyte-like Perivascular Cells

Yamamoto, K., Tanimura, K., Watanabe, M., Sano, H., Uwamori, H., Mabuchi, Y., Matsuzaki, Y., Chung, S., Kamm, R. D., Tanishita, K. & Sudo, R., 2019 Mar 1, In : Tissue Engineering - Part A. 25, 5-6, p. 499-510 12 p.

Research output: Contribution to journal › Article

Pericytes
Endothelial cells
Stem cells
Mesenchymal Stromal Cells
Human Umbilical Vein Endothelial Cells
1 Citation (Scopus)

Construction of sinusoid-scale microvessels in perfusion culture of a decellularized liver

Watanabe, M., Yano, K., Okawa, K., Yamashita, T., Tajima, K., Sawada, K., Yagi, H., Kitagawa, Y., Tanishita, K. & Sudo, R., 2019 Jan 1, (Accepted/In press) In : Acta Biomaterialia.

Research output: Contribution to journal › Article

Microvessels
Liver
Perfusion
Scaffolds (biology)
Grafts
1 Citation (Scopus)

Contact-free unconstraint respiratory measurements with load cells under the bed in awake healthy volunteers: Breath-by-breath comparison with pneumotachography

Isono, S., Nozaki-Taguchi, N., Hasegawa, M., Kato, S., Todoroki, S., Masuda, S., Iida, N., Nishimura, T., Noto, M. & Sato, Y., 2019 May 1, In : Journal of Applied Physiology. 126, 5, p. 1432-1441 10 p.

Research output: Contribution to journal › Article

Respiratory Rate
Healthy Volunteers
Posture
Respiration
Leg

Continuous alertness assessments: Using EOG glasses to unobtrusively monitor fatigue levels in-the-wild

Tag, B., Vargo, A. W., Gupta, A., Chernyshov, G., Kunze, K. S. & Dingler, T., 2019 May 2, CHI 2019 - Proceedings of the 2019 CHI Conference on Human Factors in Computing Systems. Association for Computing Machinery, (Conference on Human Factors in Computing Systems - Proceedings).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Electrooculography
Eye movements
Recommender systems
Alarm systems
Accidents

Continuous optical monitoring of red blood cells during a photosensitization reaction

Hamada, R., Ogawa, E. & Arai, T., 2019 Feb 1, In : Photobiomodulation, Photomedicine, and Laser Surgery. 37, 2, p. 110-116 7 p.

Research output: Contribution to journal › Article

Photosensitivity Disorders
Hemoglobin
Blood
Erythrocytes
Cells

Continuous separation of CO 2 from H 2 + CO 2 gas mixture utilizing clathrate hydrate for integrated gasification combined cycle power plants

Horii, S. & Ohmura, R., 2019 Jan 25, 2018 8th International Conference on Power and Energy Systems, ICPES 2018. Institute of Electrical and Electronics Engineers Inc., p. 212-216 5 p. 8626934. (2018 8th International Conference on Power and Energy Systems, ICPES 2018).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Combined cycle power plants
Hydrates
Gasification
Gas mixtures
Chemical analysis

Controlled Orientations of Neighboring Tetracene Units by Mixed Self-Assembled Monolayers on Gold Nanoclusters for High-Yield and Long-Lived Triplet Excited States through Singlet Fission

Saegusa, T., Sakai, H., Nagashima, H., Kobori, Y., Tkachenko, N. V. & Hasobe, T., 2019 Sep 18, In : Journal of the American Chemical Society. 141, 37, p. 14720-14727 8 p.

Research output: Contribution to journal › Article

Nanoclusters
Self assembled monolayers
Chain length
Excited states
Gold

Controlled release and targeting of polypeptide-deposited liposomes by enzymatic degradation

Fukui, Y., Otsuka, H. & Fujimoto, K., 2019 Jan 1, In : Polymer Journal.

Research output: Contribution to journal › Article

Liposomes
Polypeptides
Polymers
Degradation
Trypsin

Control limit on quantum state preparation under decoherence

Kobayashi, K. & Yamamoto, N., 2019 May 28, In : Physical Review A. 99, 5, 052347.

Research output: Contribution to journal › Article

preparation
feedback control
preserving
metrology
estimates

Controlling Spin-Orbit Interactions in Silicon Quantum Dots Using Magnetic Field Direction

Tanttu, T., Hensen, B., Chan, K. W., Yang, C. H., Huang, W. W., Fogarty, M., Hudson, F., Itoh, K. M., Culcer, D., Laucht, A., Morello, A. & Dzurak, A., 2019 May 10, In : Physical Review X. 9, 2, 021028.

Research output: Contribution to journal › Article

Open Access
spin-orbit interactions
quantum dots
silicon
magnetic fields
shift

Controlling the size of spherulite and the degradation of poly(butylene succinate-co-adipate) by solvent and gel preparation temperature

Yamazaki, H., Kamitabira, S., Maeda, T. & Hotta, A., 2019 Apr 1, In : Polymer Degradation and Stability. 162, p. 106-111 6 p.

Research output: Contribution to journal › Article

spherulites
butenes
Gels
gels
degradation

Control of bill-grasping aperture with varying food size in crows

Matsui, H. & Izawa, E., 2019 May 1, In : NeuroReport. 30, 7, p. 522-525 4 p.

Research output: Contribution to journal › Article

Crows
Columbidae
Biomechanical Phenomena
Social Adjustment
Food

Control of ultrafast surface plasmon coupled on a gold tapered tip and its nonlinear emission by shaped femtosecond laser pulses

Masaki, Y., Toma, K., Hirosawa, K. & Kannari, F., 2019 Jan 1, Proceedings 2015 European Conference on Lasers and Electro-Optics - European Quantum Electronics Conference, CLEO/Europe-EQEC 2015. Optical Society of America (OSA), (Proceedings 2015 European Conference on Lasers and Electro-Optics - European Quantum Electronics Conference, CLEO/Europe-EQEC 2015).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Ultrashort pulses
Gold

Cooperative transport of quad-rotor by consensus algorithm

Kotani, K. & Namerikawa, T., 2019 Jun 1, 2019 12th Asian Control Conference, ASCC 2019. Institute of Electrical and Electronics Engineers Inc., p. 1364-1369 6 p. 8765107. (2019 12th Asian Control Conference, ASCC 2019).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Rotor
Rotors
Unmanned aerial vehicles (UAV)
Cable
Multi agent systems
1 Citation (Scopus)

Copper-Catalyzed Electrophilic Amidation of Organotrifluoroborates with Use of N-Methoxyamides

Banjo, S., Nakasuji, E., Meguro, T., Satou, T. & Chida, N., 2019 Jan 1, In : Chemistry - A European Journal.

Research output: Contribution to journal › Article

Copper
Anilides
Biological Products
Functional groups
1 Citation (Scopus)

Corneal Higher-Order Aberrations in Eyes with Corneal Scar after Traumatic Perforation

Shimizu, E., Yamaguchi, T., Tsubota, K. & Shimazaki, J., 2019 Mar 1, In : Eye and Contact Lens. 45, 2, p. 124-131 8 p.

Research output: Contribution to journal › Article

Corneal Perforation
Cornea
Visual Acuity
Corneal Opacity
Tokyo

Corneal higher-order aberrations in Stevens-Johnson syndrome and toxic epidermal necrolysis

Ibrahim, O. M. A., Yagi-Yaguchi, Y., Noma, H., Tsubota, K., Shimazaki, J. & Yamaguchi, T., 2019 Jan 1, In : Ocular Surface.

Research output: Contribution to journal › Article

Stevens-Johnson Syndrome
Pathologic Dilatations
Optical Coherence Tomography
Cornea
Visual Acuity

Corneal Sensory Experience via Transient Receptor Potential Vanilloid 1 Accelerates the Maturation of Neonatal Tearing

Jin, K., Imada, T., Nakamura, S., Izuta, Y., Oonishi, E., Shibuya, M., Sakaguchi, H., Tanabe, H., Ito, M., Katanosaka, K. & Tsubota, K., 2019 Sep 1, In : American Journal of Pathology. 189, 9, p. 1699-1710 12 p.

Research output: Contribution to journal › Article

Tears
Parturition
Transient Receptor Potential Channels
Lacrimal Apparatus
vanilloid receptor subtype 1

Correction: Vedolizumab in Japanese patients with ulcerative colitis: A Phase 3, randomized, double-blind, placebo-controlled study (PLoS ONE (2019) 14:2 (e0212989) DOI: 10.1371/journal.pone.0212989)

Motoya, S., Watanabe, K., Ogata, H., Kanai, T., Matsui, T., Suzuki, Y., Shikamura, M., Sugiura, K., Oda, K., Hori, T., Araki, T., Watanabe, M. & Hibi, T., 2019 Apr 1, In : PloS one. 14, 4, e0215491.

Research output: Contribution to journal › Comment/debate

Open Access
colitis
Ulcerative Colitis
placebos
Placebos
vedolizumab

Correction: Clinical utility of novel ultrathin single-balloon enteroscopy: A feasibility study (Endoscopy (2018) (50) DOI: 10.1055/a-0656-5622)

Takabayashi, K., Hosoe, N., Miyanaga, R., Fukuhara, S., Hukuhara, K., Mizuno, S., Naganuma, M., Yahagi, N., Ogata, H. & Kanai, T., 2019 Jan 1, In : Endoscopy. 51, 5, p. C2

Research output: Contribution to journal › Comment/debate

Feasibility Studies
Endoscopy
Names
Single-Balloon Enteroscopy

Correction: Influenza vaccination effectiveness for people aged under 65 years in Japan, 2013/ 2014 season: Application of a doubly robust method to a large-scale, real-world dataset (BMC Infectious Diseases DOI: 10.1186/s12879-019-4186-x)

Shibata, N., Kimura, S., Hoshino, T. & Urushihara, H., 2019 Aug 12, In : BMC infectious diseases. 19, 1, 709.

Research output: Contribution to journal › Comment/debate

Open Access
Human Influenza
Communicable Diseases
Publications
Japan
Vaccination

Correction: ClinGen expert clinical validity curation of 164 hearing loss gene–disease pairs (Genetics in Medicine, (2019), 10.1038/s41436-019-0487-0)

on behalf of the ClinGen Hearing Loss Clinical Domain Working Group, 2019 Jan 1, In : Genetics in Medicine.

Research output: Contribution to journal › Comment/debate

Open Access
Hearing Loss
Medicine

Correction to: Thoracic and cardiovascular surgery in Japan in 2016: Annual report by The Japanese Association for Thoracic Surgery (General Thoracic and Cardiovascular Surgery, (2019), 67, 4, (377-411), 10.1007/s11748-019-01068-9)

Committee for Scientific Affairs, The Japanese Association for Thoracic Surgery, 2019 Jan 1, In : General thoracic and cardiovascular surgery.

Research output: Contribution to journal › Comment/debate

Open Access
Norwood Procedures
Annual Reports
Thoracic Surgery
Japan
Hospital Mortality

Correction to: Current status of cardiovascular surgery in Japan, 2015 and 2016, a report based on the Japan Cardiovascular Surgery Database. 3—Valvular heart surgery (General Thoracic and Cardiovascular Surgery, (2019), 67, 9, (742-749), 10.1007/s11748-019-01161-z)

Abe, T., Nakano, K., Hirahara, N., Motomura, N., Miyata, H. & Takamoto, S., 2019 Sep 5, In : General thoracic and cardiovascular surgery. 67, 9, 1 p.

Research output: Contribution to journal › Comment/debate

Open Access
Thoracic Surgery
Publications
Japan
Databases

Correction to: Risk assessments for broncho-pleural fistula and respiratory failure after lung cancer surgery by National Clinical Database Japan (General Thoracic and Cardiovascular Surgery, (2019), 67, 3, (297-305), 10.1007/s11748-018-1022-y)

Endo, S., Ikeda, N., Kondo, T., Nakajima, J., Kondo, H., Shimada, Y., Sato, M., Toyooka, S., Okada, Y., Sato, Y., Yoshino, I., Okada, M., Okumura, M., Chida, M., Fukuchi, E. & Miyata, H., 2019 Jan 1, (Accepted/In press) In : General thoracic and cardiovascular surgery.

Research output: Contribution to journal › Comment/debate

Open Access
Respiratory Insufficiency
Thoracic Surgery
Fistula
Publications
Lung Neoplasms

Correction to: Castration-resistant prostate cancer patients who had poor response on first androgen deprivation therapy would obtain certain clinical benefit from early docetaxel administration (International Journal of Clinical Oncology, (2019), 10.1007/s10147-018-01388-5)

Shigeta, K., Kosaka, T., Hongo, H., Yanai, Y., Matsumoto, K., Morita, S., Mizuno, R., Shinojima, T., Kikuchi, E. & Oya, M., 2019 Jan 1, In : International Journal of Clinical Oncology.

Research output: Contribution to journal › Comment/debate

Open Access
docetaxel
Medical Oncology
Castration
Androgens
Prostatic Neoplasms

Correction to: Prognostic significance of preoperative plasma D-dimer level in patients with surgically resected clinical stage i non-small cell lung cancer: A retrospective cohort study (Journal of Cardiothoracic Surgery DOI: 10.1186/s13019-017-0676-3)

Kaseda, K., Asakura, K., Kazama, A. & Ozawa, Y., 2019 Jun 20, In : Journal of Cardiothoracic Surgery. 14, 1, 114.

Research output: Contribution to journal › Comment/debate

Open Access
Non-Small Cell Lung Carcinoma
Cohort Studies
Retrospective Studies
fibrin fragment D

Correction to: Stickelberger ideals and Fitting ideals of class groups for abelian number fields (Mathematische Annalen, (2011), 350, 3, (549-575), 10.1007/s00208-010-0570-y)

Kurihara, M. & Miura, T., 2019 Jan 1, In : Mathematische Annalen.

Research output: Contribution to journal › Comment/debate

Open Access
Class Group
Number field
CM-field
Class number
Lemma
1 Citation (Scopus)

Correlation between changes in functional connectivity in the dorsal attention network and the after-effects induced by prism adaptation in healthy humans: A dataset of resting-state fMRI and pointing after prism adaptation

Tsujimoto, K., Mizuno, K., Nishida, D., Tahara, M., Yamada, E., Shindo, S., Watanabe, Y., Kasuga, S. & Liu, M., 2019 Feb 1, In : Data in Brief. 22, p. 583-589 7 p.

Research output: Contribution to journal › Article

Cerebellum
Motor Cortex
Magnetic Resonance Imaging
Parietal Lobe
Neuroimaging

Correlative study using structural MRI and super-resolution microscopy to detect structural alterations induced by long-term optogenetic stimulation of striatal medium spiny neurons

Abe, Y., Komaki, Y., Seki, F., Shibata, S., Okano, H. & Tanaka, K., 2019 May 1, In : Neurochemistry International. 125, p. 163-174 12 p.

Research output: Contribution to journal › Article

Optogenetics
Corpus Striatum
Microscopy
Neurons
Diffusion Tensor Imaging