A comprehensive software suite for the analysis of cDNAs

Kazuharu Arakawa, Haruo Suzuki, Kosuke Fujishima, Kenji Fujimoto, Sho Ueda, Motomu Matsui, Masaru Tomita

Research output: Contribution to journalArticle

1 Citation (Scopus)

Abstract

We have developed a comprehensive software suite for bioinformatics research of cDNAs; it is aimed at rapid characterization of the features of genes and the proteins they code. Methods implemented include the detection of translation initiation and termination signals, statistical analysis of codon usage, comparative study of amino acid composition, comparative modeling of the structures of product proteins, prediction of alternative splice forms, and metabolic pathway reconstruction.

Original languageEnglish
Pages (from-to)179-188
Number of pages10
JournalGenomics, Proteomics and Bioinformatics
Volume3
Issue number3
DOIs
Publication statusPublished - 2005 Aug

Keywords

  • Bioinformatics
  • Software
  • cDNA

ASJC Scopus subject areas

  • Biochemistry
  • Molecular Biology
  • Genetics
  • Computational Mathematics

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