A gridified protein structure prediction system 'Rokky-G' and its implementation issues

Shingo Masuda, Minoru Ikebe, Kazutoshi Fujikawa, Hideki Sunahara

Research output: Contribution to journalArticle

Abstract

In recent years, simulation using computer systems has been of increasing importance in the life sciences. We have developed a system called 'Rokky-G' that facilitates a protein structure prediction strategy called 'Rokky' on Grid systems. Rokky-G provides the framework of protein structure prediction on the Grid. In this paper we discuss the architecture of Rokky-G and implementation issues identified in order to obtain highly reliable results.

Original languageEnglish
Pages (from-to)158-166
Number of pages9
JournalStudies in Health Technology and Informatics
Volume120
Publication statusPublished - 2006

    Fingerprint

Keywords

  • Grid Computing
  • Job Priority
  • Protein structure prediction
  • Resource allocation
  • Trial-and-error

ASJC Scopus subject areas

  • Biomedical Engineering
  • Health Informatics
  • Health Information Management

Cite this