A high frequency of defective vif genes in peripheral blood mononuclear cells from HIV type 1-infected individuals

Keiko Tominaga, Shingo Kato, Masayoshi Negishi, Toshiya Takano

Research output: Contribution to journalArticle

11 Citations (Scopus)

Abstract

We studied the heterogeneity and intactness of the vif gene in six HIV- 1-infected individuals at various clinical stages. The proviral vif sequences in peripheral blood mononuclear cells were amplified by PCR, followed by cloning and sequencing of 45 vif clones. The intraindividual diversity of the vif genes ranged from 0.45 to 3.3% and was not correlated with disease stage. Although the vif gene has been shown to be essential for infection of HIV-1 in vitro, a high frequency (31%) of defective vif genes was observed. In one patient, six vif clones carried double nonsense mutations at the same positions, five of which were clustered in the phylogenetic tree, suggesting that these vif-defective viruses may have replicated in vivo. Phylogenetic analysis revealed that the vif sequences from each individual were clustered into a separate group and that all of them belong to subtype B.

Original languageEnglish
Pages (from-to)1543-1549
Number of pages7
JournalAIDS Research and Human Retroviruses
Volume12
Issue number16
Publication statusPublished - 1996 Nov 1

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vif Genes
HIV-1
Blood Cells
Clone Cells
Defective Viruses
Nonsense Codon
Organism Cloning
Polymerase Chain Reaction
Infection

ASJC Scopus subject areas

  • Immunology
  • Virology

Cite this

A high frequency of defective vif genes in peripheral blood mononuclear cells from HIV type 1-infected individuals. / Tominaga, Keiko; Kato, Shingo; Negishi, Masayoshi; Takano, Toshiya.

In: AIDS Research and Human Retroviruses, Vol. 12, No. 16, 01.11.1996, p. 1543-1549.

Research output: Contribution to journalArticle

Tominaga, Keiko ; Kato, Shingo ; Negishi, Masayoshi ; Takano, Toshiya. / A high frequency of defective vif genes in peripheral blood mononuclear cells from HIV type 1-infected individuals. In: AIDS Research and Human Retroviruses. 1996 ; Vol. 12, No. 16. pp. 1543-1549.
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