Recently, biometrics authentication has been used as various security systems. The problem is that the reliability of previous authentication decreases due to some code-breaking methods. Based on the background, the demand for new security is growing. This paper proposes new security system which uses binary hologram. It aims to add counterfeit prevention and a lot of information into previous binary hologram method. In addition, proposed method uses a high accuracy image registration called as Phase-Only Correlation method for improve the performance of security system. As a result, we achieved accurate reconstructed-image in the two dimensional image.