Determination of editors at the novel A-to-I editing positions

Yoshinori Nishimoto, Takenari Yamashita, Takuto Hideyama, Shoji Tsuji, Norihiro Suzuki, Shin Kwak

Research output: Contribution to journalArticle

36 Citations (Scopus)

Abstract

A-to-I RNA editing modifies a variety of biologically important mRNAs, and is specifically catalyzed by either adenosine deaminase acting on RNA type 1 (ADAR1) or type 2 (ADAR2) in mammals including human. Recently several novel A-to-I editing sites were identified in mRNAs abundantly expressed in mammalian organs by means of computational genomic analysis, but which enzyme catalyzes these editing sites has not been determined. Using RNA interference (RNAi) knockdowns, we found that cytoplasmic fragile X mental retardation protein interacting protein 2 (CYFIP2) mRNA had an ADAR2-mediated editing position and bladder cancer associated protein (BLCAP) mRNA had an ADAR1-mediated editing position. In addition, we found that ADAR2 forms a complex with mRNAs with ADAR2-mediated editing positions including GluR2, kv1.1 and CYFIP2 mRNAs, particularly when the editing sites were edited in human cerebellum by means of immunoprecipitation (IP) method. CYFIP2 mRNA was ubiquitously expressed in human tissues with variable extents of K/E site editing. Because ADAR2 underactivity may be a causative molecular change of death of motor neurons in sporadic amyotrophic lateral sclerosis (ALS), this newly identified ADAR2-mediated editing position may become a useful tool for ALS research.

Original languageEnglish
Pages (from-to)201-206
Number of pages6
JournalNeuroscience Research
Volume61
Issue number2
DOIs
Publication statusPublished - 2008 Jun 1

Keywords

  • Adenosine deaminase acting on RNA (ADAR)
  • Bladder cancer associated protein (BLCAP)
  • Cytoplasmic fragile X mental retardation protein interacting protein 2 (CYFIP2)
  • Immunoprecipitation (IP)
  • RNA editing
  • RNA interference (RNAi)

ASJC Scopus subject areas

  • Neuroscience(all)

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