Estimation of the genetic composition of a near-threatened tidal marsh plant, carex rugulosa, in Japan

Kako Ohbayashi, Yoshikuni Hodoki, Hidenobu Kunii

Research output: Contribution to journalArticle

3 Citations (Scopus)

Abstract

As human alterations such as riverbed excavation and harbor improvements have diminished natural littoral regions and estuarine basins, the numbers of organisms living in tidal marsh have declined. The tidal marsh halophyte Carex rugulosa has been commonly observed along the Japanese coastline over the past centuries; however, this species has recently been designated as near threatened. To determine the genetic structure of C. rugulosa, we examined the genetic composition within and among populations and attempted to clarify habitat salinity. Large populations along the Pacific Ocean exhibit relatively high clonal diversity and repeated seedling recruitment, which maintain the genotypic diversity in those populations. Conversely, lower clonal diversity is observed at the distributional margins, suggesting that marginal populations have low seedling recruitment. In terms of habitat salinity, high genetic diversities were observed between 5 and 15 psu in the Hii River watershed. The extant populations in Japan comprise three genetically distinct clusters whose population divisions correspond to the geological distribution and direction of ocean currents around Japan. Our results suggest that most C. rugulosa populations have relatively high inbreeding coefficients or low clonal diversities due to low seed recruitment or fragmentation and that reduction of genetic connectivity among populations is one causality for this low genetic diversity.

Original languageEnglish
Pages (from-to)175-184
Number of pages10
JournalWetlands
Volume32
Issue number1
DOIs
Publication statusPublished - 2012 Feb
Externally publishedYes

Fingerprint

Ocean currents
Ports and harbors
Watersheds
Excavation
Seed
marsh
Rivers
Chemical analysis
seedling
halophyte
salinity
habitat
inbreeding
genetic structure
connectivity
fragmentation
excavation
harbor
watershed
seed

Keywords

  • Clonal diversity
  • Management unit
  • Microsatellite markers
  • Near-threatened species

ASJC Scopus subject areas

  • Ecology
  • Environmental Science(all)
  • Environmental Chemistry

Cite this

Estimation of the genetic composition of a near-threatened tidal marsh plant, carex rugulosa, in Japan. / Ohbayashi, Kako; Hodoki, Yoshikuni; Kunii, Hidenobu.

In: Wetlands, Vol. 32, No. 1, 02.2012, p. 175-184.

Research output: Contribution to journalArticle

Ohbayashi, Kako ; Hodoki, Yoshikuni ; Kunii, Hidenobu. / Estimation of the genetic composition of a near-threatened tidal marsh plant, carex rugulosa, in Japan. In: Wetlands. 2012 ; Vol. 32, No. 1. pp. 175-184.
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