TY - GEN
T1 - Existence conditions for oscillations in cyclic gene regulatory networks with time delay
AU - Takada, Masaaki
AU - Hori, Yutaka
AU - Hara, Shinji
PY - 2010/12/1
Y1 - 2010/12/1
N2 - In this paper, we present analytic criteria for the existence of oscillations in gene regulatory networks with cyclic structure. In particular, inherent time delays in transcription, translation and translocation process are explicitly treated, and the effects of such time delays are quantitatively revealed. We first show that local instability of the unique equilibrium state results in oscillations of protein concentrations based on the Poincaré-Bendixson theorem for cyclic time delay systems. Then, a scheme of local instability analysis for large-scale time delay systems is introduced, and the analytic criteria for the existence of oscillations are derived. The developed criteria can be applied to cyclic gene regulatory networks consisting of any number of genes, and they are expressed only in terms of biochemical parameters, which lead to fruitful biological insight.
AB - In this paper, we present analytic criteria for the existence of oscillations in gene regulatory networks with cyclic structure. In particular, inherent time delays in transcription, translation and translocation process are explicitly treated, and the effects of such time delays are quantitatively revealed. We first show that local instability of the unique equilibrium state results in oscillations of protein concentrations based on the Poincaré-Bendixson theorem for cyclic time delay systems. Then, a scheme of local instability analysis for large-scale time delay systems is introduced, and the analytic criteria for the existence of oscillations are derived. The developed criteria can be applied to cyclic gene regulatory networks consisting of any number of genes, and they are expressed only in terms of biochemical parameters, which lead to fruitful biological insight.
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U2 - 10.1109/CCA.2010.5611130
DO - 10.1109/CCA.2010.5611130
M3 - Conference contribution
AN - SCOPUS:78649393936
SN - 9781424453627
T3 - Proceedings of the IEEE International Conference on Control Applications
SP - 830
EP - 835
BT - 2010 IEEE International Conference on Control Applications, CCA 2010
T2 - 2010 IEEE International Conference on Control Applications, CCA 2010
Y2 - 8 September 2010 through 10 September 2010
ER -