In vitro translation-based computations

Yasubumi Sakakibara; Takahiro Hohsaka

doi:10.1007/978-3-540-24628-2_19

In vitro translation-based computations

Yasubumi Sakakibara, Takahiro Hohsaka

Department of Biosciences and Informatics

Research output: Contribution to journal › Article › peer-review

3 Citations (Scopus)

Abstract

The translation system in a cell is a powerful molecular machine conducted by ribosomes, tRNAs, and several translation factors to synthesize proteins. The translation process is very accurate according to the genetic code and directed from 5′-end to 3′-end on messenger RNA. We employ the translation mechanism combined with four-base codon techniques to develop a molecular machine which computes finite automata (finite-state machine). We report some experimental results where we have succeeded to implement a finite automaton on an E. coli in vitro translation system with four-base codons.

Original language	English
Pages (from-to)	197-202
Number of pages	6
Journal	Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Volume	2943
DOIs	https://doi.org/10.1007/978-3-540-24628-2_19
Publication status	Published - 2004

ASJC Scopus subject areas

Theoretical Computer Science
Computer Science(all)

Access to Document

10.1007/978-3-540-24628-2_19

Fingerprint Dive into the research topics of 'In vitro translation-based computations'. Together they form a unique fingerprint.

Cite this

@article{2f1a31e7ea6247b7bc5db3d233f57adb,

title = "In vitro translation-based computations",

abstract = "The translation system in a cell is a powerful molecular machine conducted by ribosomes, tRNAs, and several translation factors to synthesize proteins. The translation process is very accurate according to the genetic code and directed from 5′-end to 3′-end on messenger RNA. We employ the translation mechanism combined with four-base codon techniques to develop a molecular machine which computes finite automata (finite-state machine). We report some experimental results where we have succeeded to implement a finite automaton on an E. coli in vitro translation system with four-base codons.",

author = "Yasubumi Sakakibara and Takahiro Hohsaka",

year = "2004",

doi = "10.1007/978-3-540-24628-2_19",

language = "English",

volume = "2943",

pages = "197--202",

journal = "Lecture Notes in Computer Science",

issn = "0302-9743",

publisher = "Springer Verlag",

}

TY - JOUR

T1 - In vitro translation-based computations

AU - Sakakibara, Yasubumi

AU - Hohsaka, Takahiro

PY - 2004

Y1 - 2004

N2 - The translation system in a cell is a powerful molecular machine conducted by ribosomes, tRNAs, and several translation factors to synthesize proteins. The translation process is very accurate according to the genetic code and directed from 5′-end to 3′-end on messenger RNA. We employ the translation mechanism combined with four-base codon techniques to develop a molecular machine which computes finite automata (finite-state machine). We report some experimental results where we have succeeded to implement a finite automaton on an E. coli in vitro translation system with four-base codons.

AB - The translation system in a cell is a powerful molecular machine conducted by ribosomes, tRNAs, and several translation factors to synthesize proteins. The translation process is very accurate according to the genetic code and directed from 5′-end to 3′-end on messenger RNA. We employ the translation mechanism combined with four-base codon techniques to develop a molecular machine which computes finite automata (finite-state machine). We report some experimental results where we have succeeded to implement a finite automaton on an E. coli in vitro translation system with four-base codons.

UR - http://www.scopus.com/inward/record.url?scp=35048825335&partnerID=8YFLogxK

UR - http://www.scopus.com/inward/citedby.url?scp=35048825335&partnerID=8YFLogxK

U2 - 10.1007/978-3-540-24628-2_19

DO - 10.1007/978-3-540-24628-2_19

M3 - Article

AN - SCOPUS:35048825335

VL - 2943

SP - 197

EP - 202

JO - Lecture Notes in Computer Science

JF - Lecture Notes in Computer Science

SN - 0302-9743

ER -