Optimal ratio of transcription factors for somatic cell reprogramming

Go Nagamatsu, Shigeru Saito, Takeo Kosaka, Keiyo Takubo, Taisuke Kinoshita, Mototsugu Oya, Katsuhisa Horimoto, Toshio Suda

Research output: Contribution to journalArticle

19 Citations (Scopus)

Abstract

Somatic cell reprogramming is achieved by four reprogramming transcription factors (RTFs), Oct3/4, Sox2, Klf4, and c-Myc. However, in addition to the induction of pluripotent cells, these RTFs also generate pseudo-pluripotent cells, which do not show Nanog promoter activity. Therefore, it should be possible to fine-tune the RTFs to produce only fully pluripotent cells. For this study, a tagging system was developed to sort induced pluripotent stem (iPS) cells according to the expression levels of each of the four RTFs. Using this system, the most effective ratio (Oct3/4-high, Sox2-low, Klf4-high, c-Myc-high) of the RTFs was 88 times more efficient at producing iPS cells than the worst effective ratio (Oct3/4-low, Sox2-high, Klf4-low, c-Myclow). Among the various RTF combinations, Oct3/4-high and Sox2-low produced the most efficient results. To investigate the molecular basis, microarray analysis was performed on iPS cells generated under high (Oct3/4-high and Sox2-low) and low (Oct3/4-low and Sox2-high) efficiency reprogramming conditions. Pathway analysis revealed that the G protein-coupled receptor (GPCR) pathway was up-regulated significantly under the high efficiency condition and treatment with the chemokine, C-C motif ligand 2, a member of the GPCR family, enhanced somatic cell reprogramming 12.3 times. Furthermore, data from the analysis of the signature gene expression profiles of mouse embryonic fibroblasts at 2 days after RTF infection revealed that the genetic modifier, Whsc1l1 (variant 1), also improved the efficiency of somatic cell reprogramming. Finally, comparison of the overall gene expression profiles between the high and low efficiency conditions will provide novel insights into mechanisms underlying somatic cell reprogramming.

Original languageEnglish
Pages (from-to)36273-36282
Number of pages10
JournalJournal of Biological Chemistry
Volume287
Issue number43
DOIs
Publication statusPublished - 2012 Oct 19

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Transcription Factors
Induced Pluripotent Stem Cells
Stem cells
G-Protein-Coupled Receptors
Transcriptome
Gene expression
Chemokine CCL2
Fibroblasts
Microarray Analysis
Microarrays
Cellular Reprogramming
Cells
Infection

ASJC Scopus subject areas

  • Biochemistry
  • Cell Biology
  • Molecular Biology

Cite this

Optimal ratio of transcription factors for somatic cell reprogramming. / Nagamatsu, Go; Saito, Shigeru; Kosaka, Takeo; Takubo, Keiyo; Kinoshita, Taisuke; Oya, Mototsugu; Horimoto, Katsuhisa; Suda, Toshio.

In: Journal of Biological Chemistry, Vol. 287, No. 43, 19.10.2012, p. 36273-36282.

Research output: Contribution to journalArticle

Nagamatsu, G, Saito, S, Kosaka, T, Takubo, K, Kinoshita, T, Oya, M, Horimoto, K & Suda, T 2012, 'Optimal ratio of transcription factors for somatic cell reprogramming', Journal of Biological Chemistry, vol. 287, no. 43, pp. 36273-36282. https://doi.org/10.1074/jbc.M112.380683
Nagamatsu, Go ; Saito, Shigeru ; Kosaka, Takeo ; Takubo, Keiyo ; Kinoshita, Taisuke ; Oya, Mototsugu ; Horimoto, Katsuhisa ; Suda, Toshio. / Optimal ratio of transcription factors for somatic cell reprogramming. In: Journal of Biological Chemistry. 2012 ; Vol. 287, No. 43. pp. 36273-36282.
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