Publisher Correction

IMSindel: An accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split read analysis (Scientific Reports (2018) DOI: 10.1038/s41598-018-23978-z)

Daichi Shigemizu, Fuyuki Miya, Shintaro Akiyama, Shujiro Okuda, Keith A. Boroevich, Akihiro Fujimoto, Hidewaki Nakagawa, Kouichi Ozaki, Shumpei Niida, Yonehiro Kanemura, Nobuhiko Okamoto, Shinji Saitoh, Mitsuhiro Kato, Mami Yamasaki, Tatsuo Matsunaga, Hideki Mutai, Kenjiro Kosaki, Tatsuhiko Tsunoda

Research output: Contribution to journalComment/debate

Abstract

This Article contains an error in the Results section under the subheading 'Performance comparison among call methods using simulation data'. We found that when the insertions were ?2 bp length and contained repetitive sequence from the flanking region, de novo assembly (Inchworm) did not work well (Table S3)." should read: We found that when the insertions were ?25 bp length and contained repetitive sequence from the flanking region, de novo assembly (Inchworm) did not work well (Table S3).".

Original languageEnglish
Article number10367
JournalScientific Reports
Volume8
Issue number1
DOIs
Publication statusPublished - 2018 Dec 1

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Nucleic Acid Repetitive Sequences

ASJC Scopus subject areas

  • General

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Publisher Correction : IMSindel: An accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split read analysis (Scientific Reports (2018) DOI: 10.1038/s41598-018-23978-z). / Shigemizu, Daichi; Miya, Fuyuki; Akiyama, Shintaro; Okuda, Shujiro; Boroevich, Keith A.; Fujimoto, Akihiro; Nakagawa, Hidewaki; Ozaki, Kouichi; Niida, Shumpei; Kanemura, Yonehiro; Okamoto, Nobuhiko; Saitoh, Shinji; Kato, Mitsuhiro; Yamasaki, Mami; Matsunaga, Tatsuo; Mutai, Hideki; Kosaki, Kenjiro; Tsunoda, Tatsuhiko.

In: Scientific Reports, Vol. 8, No. 1, 10367, 01.12.2018.

Research output: Contribution to journalComment/debate

Shigemizu, D, Miya, F, Akiyama, S, Okuda, S, Boroevich, KA, Fujimoto, A, Nakagawa, H, Ozaki, K, Niida, S, Kanemura, Y, Okamoto, N, Saitoh, S, Kato, M, Yamasaki, M, Matsunaga, T, Mutai, H, Kosaki, K & Tsunoda, T 2018, 'Publisher Correction: IMSindel: An accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split read analysis (Scientific Reports (2018) DOI: 10.1038/s41598-018-23978-z)', Scientific Reports, vol. 8, no. 1, 10367. https://doi.org/10.1038/s41598-018-28698-y
Shigemizu, Daichi ; Miya, Fuyuki ; Akiyama, Shintaro ; Okuda, Shujiro ; Boroevich, Keith A. ; Fujimoto, Akihiro ; Nakagawa, Hidewaki ; Ozaki, Kouichi ; Niida, Shumpei ; Kanemura, Yonehiro ; Okamoto, Nobuhiko ; Saitoh, Shinji ; Kato, Mitsuhiro ; Yamasaki, Mami ; Matsunaga, Tatsuo ; Mutai, Hideki ; Kosaki, Kenjiro ; Tsunoda, Tatsuhiko. / Publisher Correction : IMSindel: An accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split read analysis (Scientific Reports (2018) DOI: 10.1038/s41598-018-23978-z). In: Scientific Reports. 2018 ; Vol. 8, No. 1.
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T2 - IMSindel: An accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split read analysis (Scientific Reports (2018) DOI: 10.1038/s41598-018-23978-z)

AU - Shigemizu, Daichi

AU - Miya, Fuyuki

AU - Akiyama, Shintaro

AU - Okuda, Shujiro

AU - Boroevich, Keith A.

AU - Fujimoto, Akihiro

AU - Nakagawa, Hidewaki

AU - Ozaki, Kouichi

AU - Niida, Shumpei

AU - Kanemura, Yonehiro

AU - Okamoto, Nobuhiko

AU - Saitoh, Shinji

AU - Kato, Mitsuhiro

AU - Yamasaki, Mami

AU - Matsunaga, Tatsuo

AU - Mutai, Hideki

AU - Kosaki, Kenjiro

AU - Tsunoda, Tatsuhiko

PY - 2018/12/1

Y1 - 2018/12/1

N2 - This Article contains an error in the Results section under the subheading 'Performance comparison among call methods using simulation data'. We found that when the insertions were ?2 bp length and contained repetitive sequence from the flanking region, de novo assembly (Inchworm) did not work well (Table S3)." should read: We found that when the insertions were ?25 bp length and contained repetitive sequence from the flanking region, de novo assembly (Inchworm) did not work well (Table S3).".

AB - This Article contains an error in the Results section under the subheading 'Performance comparison among call methods using simulation data'. We found that when the insertions were ?2 bp length and contained repetitive sequence from the flanking region, de novo assembly (Inchworm) did not work well (Table S3)." should read: We found that when the insertions were ?25 bp length and contained repetitive sequence from the flanking region, de novo assembly (Inchworm) did not work well (Table S3).".

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U2 - 10.1038/s41598-018-28698-y

DO - 10.1038/s41598-018-28698-y

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VL - 8

JO - Scientific Reports

JF - Scientific Reports

SN - 2045-2322

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