Structure of Musashi1 in a complex with target RNA

The role of aromatic stacking interactions

Takako Ohyama, Takashi Nagata, Kengo Tsuda, Naohiro Kobayashi, Takao Imai, Hideyuki Okano, Toshio Yamazaki, Masato Katahira

Research output: Contribution to journalArticle

39 Citations (Scopus)

Abstract

Mammalian Musashi1 (Msi1) is an RNA-binding protein that regulates the translation of target mRNAs, and participates in the maintenance of cell 'stemness' and tumorigenesis. Msi1 reportedly binds to the 3′-untranslated region of mRNA of Numb, which encodes Notch inhibitor, and impedes initiation of its translation by competing with eIF4G for PABP binding, resulting in triggering of Notch signaling. Here, the mechanism by which Msi1 recognizes the target RNA sequence using its Ribonucleoprotein (RNP)-type RNA-binding domains (RBDs), RBD1 and RBD2 has been revealed on identification of the minimal binding RNA for each RBD and determination of the three-dimensional structure of the RBD1:RNA complex. Unique interactions were found for the recognition of the target sequence by Msi1 RBD1: adenine is sandwiched by two phenylalanines and guanine is stacked on the tryptophan in the loop between β1 and α1. The minimal recognition sequences that we have defined for Msi1 RBD1 and RBD2 have actually been found in many Msi1 target mRNAs reported to date. The present study provides molecular clues for understanding the biology involving Musashi family proteins.

Original languageEnglish
Pages (from-to)3218-3231
Number of pages14
JournalNucleic Acids Research
Volume40
Issue number7
DOIs
Publication statusPublished - 2012 Apr

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RNA
Messenger RNA
Ribonucleoproteins
RNA-Binding Proteins
Guanine
Protein Biosynthesis
3' Untranslated Regions
Adenine
Phenylalanine
Tryptophan
Carcinogenesis
Maintenance
Proteins
RNA-Binding Motifs

ASJC Scopus subject areas

  • Genetics

Cite this

Structure of Musashi1 in a complex with target RNA : The role of aromatic stacking interactions. / Ohyama, Takako; Nagata, Takashi; Tsuda, Kengo; Kobayashi, Naohiro; Imai, Takao; Okano, Hideyuki; Yamazaki, Toshio; Katahira, Masato.

In: Nucleic Acids Research, Vol. 40, No. 7, 04.2012, p. 3218-3231.

Research output: Contribution to journalArticle

Ohyama, T, Nagata, T, Tsuda, K, Kobayashi, N, Imai, T, Okano, H, Yamazaki, T & Katahira, M 2012, 'Structure of Musashi1 in a complex with target RNA: The role of aromatic stacking interactions', Nucleic Acids Research, vol. 40, no. 7, pp. 3218-3231. https://doi.org/10.1093/nar/gkr1139
Ohyama, Takako ; Nagata, Takashi ; Tsuda, Kengo ; Kobayashi, Naohiro ; Imai, Takao ; Okano, Hideyuki ; Yamazaki, Toshio ; Katahira, Masato. / Structure of Musashi1 in a complex with target RNA : The role of aromatic stacking interactions. In: Nucleic Acids Research. 2012 ; Vol. 40, No. 7. pp. 3218-3231.
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