Various types of LRP5 mutations in four patients with osteoporosis- pseudoglioma syndrome: Identification of a 7.2-kb microdeletion using oligonucleotide tiling microarray

Satoshi Narumi, Chikahiko Numakura, Takashi Shiihara, Chizuru Seiwa, Yasuyuki Nozaki, Takanori Yamagata, Mariko Y. Momoi, Yoriko Watanabe, Makoto Yoshino, Toyojiro Matsuishi, Eriko Nishi, Hiroshi Kawame, Tsutomu Akahane, Gen Nishimura, Mitsuru Emi, Tomonobu Hasegawa

Research output: Contribution to journalArticle

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Abstract

Osteoporosis-pseudoglioma syndrome (OPS; OMIM 259770) is an autosomal-recessive genetic disorder characterized by severe osteoporosis and visual disturbance from childhood. Biallelic mutations in the low-density lipoprotein receptor-related protein 5 gene (LRP5) have been frequently detected, while a subset of patients had only one or no detectable mutation.Wereport on the clinical and molecular findings of four unrelated Japanese patientswiththe syndrome.Thefour patients had typical skeletal and ocular phenotypes of OPS, namely severe juvenile osteoporosis and early-onset visual disturbance, with or without mental retardation. We undertook standard PCR-based sequencing for LRP5 and found four missense mutations (p.L145F, p.T244M, p.P382L, and p.T552M), one nonsense mutation(p.R1534X), and one splice site mutation (c.1584+1G>A) among four OPS patients. Although three patients had two heterozygous mutations, one had only one heterozygous splice site mutation. In this patient, RT-PCR from lymphocytic RNA demonstrated splice error resulting in 63-bp insertion between exons 7 and 8. Furthermore, the patient was found to have only mutated RT-PCR fragment, implying that a seemingly normal allele did not express LRP5 mRNA. We then conducted custom-designed oligonucleotide tiling microarray analyses targeted to a 600-kb genome region harboring LRP5 and discovered a 7.2-kb microdeletion encompassing exons 22 and 23 of LRP5. We found various types of LRP5 mutations, including an exon-level deletion that is undetectable by standard PCR-based mutation screening. Oligonucleotide tiling microarray seems to be a powerful tool in identifying cryptic structural mutations.

Original languageEnglish
Pages (from-to)133-140
Number of pages8
JournalAmerican Journal of Medical Genetics, Part A
Volume152
Issue number1
DOIs
Publication statusPublished - 2010 Jan

Fingerprint

Low Density Lipoprotein Receptor-Related Protein-5
Oligonucleotide Array Sequence Analysis
Mutation
Genes
Exons
Polymerase Chain Reaction
Genetic Databases
Inborn Genetic Diseases
Osteoporosis-pseudoglioma syndrome
Nonsense Codon
Missense Mutation
Microarray Analysis
Intellectual Disability
Osteoporosis
Alleles
Genome
RNA

Keywords

  • Comparative genomic hybridization
  • Low-density lipoprotein receptor-related protein 5 (LRP5)
  • Microdeletion
  • Mutation
  • Osteoporosis-pseudoglioma syndrome

ASJC Scopus subject areas

  • Genetics(clinical)
  • Genetics

Cite this

Various types of LRP5 mutations in four patients with osteoporosis- pseudoglioma syndrome : Identification of a 7.2-kb microdeletion using oligonucleotide tiling microarray. / Narumi, Satoshi; Numakura, Chikahiko; Shiihara, Takashi; Seiwa, Chizuru; Nozaki, Yasuyuki; Yamagata, Takanori; Momoi, Mariko Y.; Watanabe, Yoriko; Yoshino, Makoto; Matsuishi, Toyojiro; Nishi, Eriko; Kawame, Hiroshi; Akahane, Tsutomu; Nishimura, Gen; Emi, Mitsuru; Hasegawa, Tomonobu.

In: American Journal of Medical Genetics, Part A, Vol. 152, No. 1, 01.2010, p. 133-140.

Research output: Contribution to journalArticle

Narumi, S, Numakura, C, Shiihara, T, Seiwa, C, Nozaki, Y, Yamagata, T, Momoi, MY, Watanabe, Y, Yoshino, M, Matsuishi, T, Nishi, E, Kawame, H, Akahane, T, Nishimura, G, Emi, M & Hasegawa, T 2010, 'Various types of LRP5 mutations in four patients with osteoporosis- pseudoglioma syndrome: Identification of a 7.2-kb microdeletion using oligonucleotide tiling microarray', American Journal of Medical Genetics, Part A, vol. 152, no. 1, pp. 133-140. https://doi.org/10.1002/ajmg.a.33177
Narumi, Satoshi ; Numakura, Chikahiko ; Shiihara, Takashi ; Seiwa, Chizuru ; Nozaki, Yasuyuki ; Yamagata, Takanori ; Momoi, Mariko Y. ; Watanabe, Yoriko ; Yoshino, Makoto ; Matsuishi, Toyojiro ; Nishi, Eriko ; Kawame, Hiroshi ; Akahane, Tsutomu ; Nishimura, Gen ; Emi, Mitsuru ; Hasegawa, Tomonobu. / Various types of LRP5 mutations in four patients with osteoporosis- pseudoglioma syndrome : Identification of a 7.2-kb microdeletion using oligonucleotide tiling microarray. In: American Journal of Medical Genetics, Part A. 2010 ; Vol. 152, No. 1. pp. 133-140.
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