生命情報学科

研究成果

2020

An improved de novo genome assembly of the common marmoset genome yields improved contiguity and increased mapping rates of sequence data

Jayakumar, V., Ishii, H., Seki, M., Kumita, W., Inoue, T., Hase, S., Sato, K., Okano, H., Sasaki, E. & Sakakibara, Y., 2020 4 2, : : BMC Genomics. 21, 243.

研究成果: Article

公開

Avian Influenza Virus Detection by Optimized Peptide Termination on a Boron-Doped Diamond Electrode

Matsubara, T., Ujie, M., Yamamoto, T., Einaga, Y., Daidoji, T., Nakaya, T. & Sato, T., 2020 2 28, : : ACS Sensors. 5, 2, p. 431-439 9 p.

研究成果: Article

BRUP-1, an intracellular bilirubin modulator, exerts neuroprotective activity in a cellular Parkinson’s disease model

Kataura, T., Saiki, S., Ishikawa, K. I., Akamatsu, W., Sasazawa, Y., Hattori, N. & Imoto, M., 2020 1 1, (Accepted/In press) : : Journal of Neurochemistry.

研究成果: Article

Cadinane sesquiterpenoids isolated from Santalum album using a screening program for Wnt signal inhibitory activity

Sato, T., Arai, M. A., Yixizhuoma, Hara, Y., Koyano, T., Kowithayakorn, T. & Ishibashi, M., 2020 3 1, : : Journal of Natural Medicines. 74, 2, p. 476-481 6 p.

研究成果: Article

Conformational equilibrium of MinE regulates the allowable concentration ranges of a protein wave for cell division

Kohyama, S., Fujiwara, K., Yoshinaga, N. & Doi, N., 2020 6 11, : : Nanoscale. 12, 22, p. 11960-11970 11 p.

研究成果: Article

公開

Dielectrophoretic sorting system for screening of NAD(P)-dependent oxidoreductases.

Kanai, Y., Shimokihara, S., Shitara, S., Oyobiki, R., Watanabe, T., Einaga, Y., Wakamatsu, K., Matsumoto, Y., Fujiwara, K. & Doi, N., 2020 1 1, 21st International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2017. Chemical and Biological Microsystems Society, p. 1383-1384 2 p. (21st International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2017).

研究成果: Conference contribution

Different strategies for tissue scaling in dwarf tailbud embryos revealed by single-cell analysis

Matsumura, K. D., Nakamura, M. J., Koizumi, W. C., Hotta, K. & Oka, K., 2020 4 15, : : Developmental Biology. 460, 2, p. 215-223 9 p.

研究成果: Article

Discovery of “heat shock metabolites” produced by thermotolerant actinomycetes in high-temperature culture

Saito, S., Kato, W., Ikeda, H., Katsuyama, Y., Ohnishi, Y. & Imoto, M., 2020 4 1, : : Journal of Antibiotics. 73, 4, p. 203-210 8 p.

研究成果: Article

Identification of a master transcription factor and a regulatory mechanism for desiccation tolerance in the anhydrobiotic cell line Pv11

Yamada, T. G., Hiki, Y., Hiroi, N. F., Shagimardanova, E., Gusev, O., Cornette, R., Kikawada, T. & Funahashi, A., 2020 1 1, : : PloS one. 15, 3, e0230218.

研究成果: Article

公開

Ikoamide, an Antimalarial Lipopeptide from an Okeania sp. Marine Cyanobacterium

Iwasaki, K., Iwasaki, A., Sumimoto, S., Matsubara, T., Sato, T., Nozaki, T., Saito-Nakano, Y. & Suenaga, K., 2020 2 28, : : Journal of Natural Products. 83, 2, p. 481-488 8 p.

研究成果: Article

1 引用 (Scopus)

Microfluidic screening system based on boron-doped diamond electrodes and dielectrophoretic sorting for directed evolution of NAD(P)-dependent oxidoreductases

Goto, H., Kanai, Y., Yotsui, A., Shimokihara, S., Shitara, S., Oyobiki, R., Fujiwara, K., Watanabe, T., Einaga, Y., Matsumoto, Y., Miki, N. & Doi, N., 2020 2 21, : : Lab on a Chip. 20, 4, p. 852-861 10 p.

研究成果: Article

2 引用 (Scopus)

Neural differentiation dynamics controlled by multiple feedback loops in a comprehensive molecular interaction network

Iwasaki, T., Takiguchi, R., Hiraiwa, T., Yamada, T. G., Yamazaki, K., Hiroi, N. F. & Funahashi, A., 2020 2 1, : : Processes. 8, 2, 166.

研究成果: Article

公開

Neurofeedback

Hampson, M., Ruiz, S. & Ushiba, J., 2020 1 1, (Accepted/In press) : : NeuroImage. 116473.

研究成果: Editorial

公開

Optical Dissection of Synaptic Plasticity for Early Adaptation in Caenorhabditis elegans

Ashida, K., Shidara, H., Hotta, K. & Oka, K., 2020 1 21, : : Neuroscience. 428, p. 112-121 10 p.

研究成果: Article

2019

A self-marker-like protein governs hemocyte allorecognition in Halocynthia roretzi

Ema, M., Okada, T., Takahashi, M., Uchiyama, M., Kubo, H., Moriyama, H., Miyakawa, H. & Matsumoto, M., 2019 12 16, : : Zoological Letters. 5, 1, 34.

研究成果: Article

公開

Biodegradation of PET: Current Status and Application Aspects

Taniguchi, I., Yoshida, S., Hiraga, K., Miyamoto, K., Kimura, Y. & Oda, K., 2019 1 1, : : ACS Catalysis. p. 4089-4105 17 p.

研究成果: Article

17 引用 (Scopus)

Cell-sized confinement controls generation and stability of a protein wave for spatiotemporal regulation in cells

Kohyama, S., Yoshinaga, N., Yanagisawa, M., Fujiwara, K. & Doi, N., 2019 7 1, : : eLife. 8, e44591.

研究成果: Article

公開
1 引用 (Scopus)

Chemoenzymatic Cascade Synthesis of Optically Pure Alkanoic Acids by Using Engineered Arylmalonate Decarboxylase Variants

Enoki, J., Mügge, C., Tischler, D., Miyamoto, K. & Kourist, R., 2019 4 1, : : Chemistry - A European Journal. 25, 19, p. 5071-5076 6 p.

研究成果: Article

公開
1 引用 (Scopus)
2 引用 (Scopus)
公開
1 引用 (Scopus)

Development of Rehabilitation System with Brain-Computer Interface for Subacute Stroke Patients

Hashimoto, Y., Kakui, T., Ushiba, J., Liu, M., Kamada, K. & Ota, T., 2019 1 16, Proceedings - 2018 IEEE International Conference on Systems, Man, and Cybernetics, SMC 2018. Institute of Electrical and Electronics Engineers Inc., p. 51-56 6 p. 8616013. (Proceedings - 2018 IEEE International Conference on Systems, Man, and Cybernetics, SMC 2018).

研究成果: Conference contribution

公開
2 引用 (Scopus)

Efficient generation of Knock-in/Knock-out marmoset embryo via CRISPR/Cas9 gene editing

Kumita, W., Sato, K., Suzuki, Y., Kurotaki, Y., Harada, T., Zhou, Y., Kishi, N., Sato, K., Aiba, A., Sakakibara, Y., Feng, G., Okano, H. & Sasaki, E., 2019 12 1, : : Scientific reports. 9, 1, 12719.

研究成果: Article

公開
1 引用 (Scopus)

Enzyme kinetics of dUTPase from the planarian Dugesia ryukyuensis

Alam, M. S., Moriyama, H. & Matsumoto, M., 2019 3 22, : : BMC Research Notes. 12, 1, 163.

研究成果: Article

1 引用 (Scopus)

Fast Electrophysiological Mapping of Rat Cortical Motor Representation on a Time Scale of Minutes during Skin Stimulation

Kosugi, A., Castagnola, E., Carli, S., Ricci, D., Fadiga, L., Taoka, M., Iriki, A. & Ushiba, J., 2019 8 21, : : Neuroscience. 414, p. 245-254 10 p.

研究成果: Article

Ktedonoketone and 2’-oxosattabacin, benzenoid metabolites from a thermophilic bacterium Thermosporothrix hazakensis in the phylum Chloroflexi

Igarashi, Y., Yamamoto, K., Ueno, C., Yamada, N., Saito, K., Takahashi, K., Enomoto, M., Kuwahara, S., Oikawa, T., Tashiro, E., Imoto, M., Xiaohanyao, Y., Zhou, T., Harunari, E. & Oku, N., 2019 9 1, : : Journal of Antibiotics. 72, 9, p. 653-660 8 p.

研究成果: Article

2 引用 (Scopus)

Magnesium is a key player in neuronal maturation and neuropathology

Yamanaka, R., Shindo, Y. & Oka, K., 2019 7 2, : : International journal of molecular sciences. 20, 14, 3439.

研究成果: Article

公開
2 引用 (Scopus)
1 引用 (Scopus)

Neurorehabilitation: Neural Plasticity and Functional Recovery 2018

Fujiwara, T., Ushiba, J. & Soekadar, S. R., 2019 1 1, : : Neural plasticity. 2019, 1 p.

研究成果: Editorial

公開

Poly-γ-glutamic acid production of Bacillus subtilis (natto) in the absence of DegQ: A gain-of-function mutation in yabJ gene

Hong, L. T. T., Hachiya, T., Hase, S., Shiwa, Y., Yoshikawa, H., Sakakibara, Y., Nguyen, S. L. T. & Kimura, K., 2019 1 1, : : Journal of Bioscience and Bioengineering.

研究成果: Article

Predicting the future direction of cell movement with convolutional neural networks

Nishimoto, S., Tokuoka, Y., Yamada, T., Hiroi, N. F. & Funahashi, A., 2019 1 1, : : PloS one. 14, 9, e0221245.

研究成果: Article

公開
1 引用 (Scopus)

Preparation of optically pure flurbiprofen via an integrated chemo-enzymatic synthesis pathway

Enoki, J., Linhorst, M., Busch, F., Baraibar, Á. G., Miyamoto, K., Kourist, R. & Mügge, C., 2019 4 1, : : Molecular Catalysis. 467, p. 135-142 8 p.

研究成果: Article

1 引用 (Scopus)

Regulation of spatiotemporal patterning in artificial cells by a defined protein expression system

Yoshida, A., Kohyama, S., Fujiwara, K., Nishikawa, S. & Doi, N., 2019 1 1, : : Chemical Science. 10, 48, p. 11064-11072 9 p.

研究成果: Article

公開
1 引用 (Scopus)
1 引用 (Scopus)

Sensorimotor Connectivity after Motor Exercise with Neurofeedback in Post-Stroke Patients with Hemiplegia

Tsuchimoto, S., Shindo, K., Hotta, F., Hanakawa, T., Liu, M. & Ushiba, J., 2019 9 15, : : Neuroscience. 416, p. 109-125 17 p.

研究成果: Article

Serotonin modulates behavior-related neural activity of RID interneuron in Caenorhabditis elegans

Mori, H., Ashida, K., Shidara, H., Nikai, T., Hotta, K. & Oka, K., 2019 1 1, : : PloS one. 14, 12, e0226044.

研究成果: Article

公開
2 引用 (Scopus)
公開
1 引用 (Scopus)

Topological Design of Star Glycopolymers for Controlling the Interaction with the Influenza Virus

Nagao, M., Matsubara, T., Hoshino, Y., Sato, T. & Miura, Y., 2019 4 17, : : Bioconjugate Chemistry. 30, 4, p. 1192-1198 7 p.

研究成果: Article

4 引用 (Scopus)