生命情報学科

研究成果

(+)-(4aR,9aS)-O-(4-Bromobenzoyl)-N-(3-methylanthracen-9-ylidene) hydroxylamine

Ohba, S., Ishida, N., Kato, D. I., Miyamoto, K. & Ohta, H., 2006 6 1, : : Acta Crystallographica Section E: Structure Reports Online. 61, 6, p. o1620-o1621

研究成果: Article

1 引用 (Scopus)

(R)-1-Phenyl-1-ethylammonium (R)-2-hydroxymethyl-2-(2-naphthyl)propanoate

Ohba, S., Tsutsumi, T., Terao, Y., Miyamoto, K. & Ohta, H., 2005 5 1, : : Acta Crystallographica Section E: Structure Reports Online. 61, 5, p. o1283-o1285

研究成果: Article

2 引用 (Scopus)

14-3-3ϵa directs the pulsatile transport of basal factors toward the apical domain for lumen growth in tubulogenesis

Mizotani, Y., Suzuki, M., Hotta, K., Watanabe, H., Shiba, K., Inaba, K., Tashiro, E., Oka, K. & Imoto, M., 2018 9 18, : : Proceedings of the National Academy of Sciences of the United States of America. 115, 38, p. E8873-E8881

研究成果: Article

3 引用 (Scopus)

3466-3476 Chromomycins a2and a3from marine actinomycetes with TRAIL resistance-overcoming and wnt signal inhibitory activities

Toume, K., Tsukahara, K., Ito, H., Arai, M. A. & Ishibashi, M., 2014 6, : : Marine Drugs. 12, 6, p. 3466-3476 11 p.

研究成果: Article

公開
18 引用 (Scopus)
4 引用 (Scopus)

5-Lipoxygenase and cysteinyl leukotriene receptor 1 regulate epidermal growth factor-induced cell migration through Tiam1 upregulation and Rac1 activation

Magi, S., Takemoto, Y., Kobayashi, H., Kasamatsu, M., Akita, T., Tanaka, A., Takano, K., Tashiro, E., Igarashi, Y. & Imoto, M., 2014 3, : : Cancer science. 105, 3, p. 290-296 7 p.

研究成果: Article

19 引用 (Scopus)

A bacterium that degrades and assimilates poly(ethylene terephthalate)

Yoshida, S., Hiraga, K., Takehana, T., Taniguchi, I., Yamaji, H., Maeda, Y., Toyohara, K., Miyamoto, K., Kimura, Y. & Oda, K., 2016 3 11, : : Science. 351, 6278, p. 1196-1199 4 p.

研究成果: Article

338 引用 (Scopus)

A bicyclic 1-deoxygalactonojirimycin derivative as a novel pharmacological chaperone for GM1 gangliosidosis

Takai, T., Higaki, K., Aguilar-Moncayo, M., Mena-Barragán, T., Hirano, Y., Yura, K., Yu, L., Ninomiya, H., García-Moreno, M. I., Sakakibara, Y., Ohno, K., Nanba, E., Ortiz Mellet, C., García Fernández, J. M. & Suzuki, Y., 2013 3, : : Molecular Therapy. 21, 3, p. 526-532 7 p.

研究成果: Article

48 引用 (Scopus)

Accelerated biosynthesis of neolacto-series glycosphingolipids in differentiated mouse embryonal carcinoma F9 cells detected by using dodecyl N-acetylglucosaminide as a saccharide primer

Ogasawara, N., Katagiri, Y. U., Kiyokawa, N., Kaneko, T., Sato, B., Nakajima, H., Miyagawa, Y., Kushi, Y., Ishida, H., Kiso, M., Okita, H., Sato, T. & Fujimoto, J., 2011 3 1, : : Journal of biochemistry. 149, 3, p. 321-330 10 p.

研究成果: Article

6 引用 (Scopus)

Acceleration of discrete stochastic biochemical simulation using GPGPU

Sumiyoshi, K., Hirata, K., Hiroi, N. & Funahashi, A., 2015 1 1, : : Frontiers in Physiology. 6, FEB, 42.

研究成果: Article

7 引用 (Scopus)
5 引用 (Scopus)

Accurate identification of orthologous segments among multiple genomes

Hachiya, T., Osana, Y., Popendorf, K. & Sakakibara, Y., 2009 4 7, : : Bioinformatics. 25, 7, p. 853-860 8 p.

研究成果: Article

24 引用 (Scopus)

Accurate motor mapping in awake common marmosets using micro-electrocorticographical stimulation and stochastic threshold estimation

Kosugi, A., Takemi, M., Tia, B., Castagnola, E., Ansaldo, A., Sato, K., Awiszus, F., Seki, K., Ricci, D., Fadiga, L., Iriki, A. & Ushiba, J., 2018 4 6, : : Journal of neural engineering. 15, 3, 036019.

研究成果: Article

1 引用 (Scopus)

A chemical genomic study identifying diversity in cell migration signaling in cancer cells

Magi, S., Tashiro, E. & Imoto, M., 2012 11 22, : : Scientific reports. 2, 823.

研究成果: Article

7 引用 (Scopus)

A chloride ion channel in Halocynthia roretzi hemocytes is associated with PO activity but not pigmentation during the contact reaction

Miyakawa, H., Kumano, M., Hoshi, M., Takeda, N. & Matsumoto, M., 2008 11 1, : : Zoological Science. 25, 11, p. 1130-1138 9 p.

研究成果: Article

1 引用 (Scopus)

A combining technique of rate law functions for a cost-effective reconfigurable biological simulator

Yamada, H., Iwanaga, N., Shibata, Y., Osana, Y., Yoshimi, M., Iwaoka, Y., Nishikawa, Y., Kojima, T., Amano, H., Funahashi, A., Hiroi, N., Hiroaki Kitano, K. & Kiyoshi Oguri, O., 2007 12 1, Proceedings - 2007 International Conference on Field Programmable Logic and Applications, FPL. p. 808-811 4 p. 4380774. (Proceedings - 2007 International Conference on Field Programmable Logic and Applications, FPL).

研究成果: Conference contribution

2 引用 (Scopus)
2 引用 (Scopus)

A comprehensive pathway map of epidermal growth factor receptor signaling.

Oda, K., Matsuoka, Y., Funahashi, A. & Kitano, H., 2005, : : Molecular systems biology. 1, p. 2005.0010

研究成果: Article

686 引用 (Scopus)

Acquisition of a mental strategy to control a virtual tail via brain–computer interface

Fujisawa, A., Kasuga, S., Suzuki, T. & Ushiba, J., 2018 1 26, (Accepted/In press) : : Cognitive Neuroscience. p. 1-14 14 p.

研究成果: Article

Acrosome reaction in starfish: Signal molecules in the jelly coat and their receptors

Hoshi, M., Nishigaki, T., Kawamura, M., Ikeda, M., Gunaratne, J., Ueno, S., Ogiso, M., Moriyama, H. & Matsumoto, M., 2000 1 1, : : Zygote. 8, SUPPL., p. S26-S27

研究成果: Article

4 引用 (Scopus)

Acrosome reaction is subfamily specific in sea star fertilization

Nakachi, M., Moriyama, H., Hoshi, M. & Matsumoto, M., 2006 10 15, : : Developmental Biology. 298, 2, p. 597-604 8 p.

研究成果: Article

12 引用 (Scopus)

Acrosome reaction-related steroidal saponin, Co-ARIS, from the starfish induces structural changes in microdomains

Naruse, M., Suetomo, H., Matsubara, T., Sato, T., Yanagawa, H., Hoshi, M. & Matsumoto, M., 2010 11 1, : : Developmental Biology. 347, 1, p. 147-153 7 p.

研究成果: Article

13 引用 (Scopus)

A cumulative sum test for a peri-stimulus time histogram using the Monte Carlo method

Ushiba, J., Tomita, Y., Masakado, Y. & Komune, Y., 2002 8 30, : : Journal of Neuroscience Methods. 118, 2, p. 207-214 8 p.

研究成果: Article

15 引用 (Scopus)

Adaptive routing on the recursive diagonal torus

Funahashi, A., Hanawa, T., Kudoh, T. & Amano, H., 1997, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Springer Verlag, 巻 1336. p. 171-182 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); 巻数 1336).

研究成果: Conference contribution

1 引用 (Scopus)

A datapath classification method for FPGA-based scientific application accelerator systems

Ogawa, Y., Ooya, T., Osana, Y., Yoshimi, M., Nishikawa, Y., Funahashi, A., Hiroi, N., Amano, H., Shibata, Y. & Oguri, K., 2010 12 1, Proceedings - 2010 International Conference on Field-Programmable Technology, FPT'10. p. 441-444 4 p. 5681455. (Proceedings - 2010 International Conference on Field-Programmable Technology, FPT'10).

研究成果: Conference contribution

2 引用 (Scopus)

Affinity selection of DNA-binding protein complexes using mRNA display

Tateyama, S., Horisawa, K., Takashima, H., Miyamoto-Sato, E., Doi, N. & Yanagawa, H., 2006 3 20, : : Nucleic acids research. 34, 3, e27.

研究成果: Article

31 引用 (Scopus)

A framework for implementing a network-based stochastic biochemical simulator on an FPGA

Yoshimi, M., Nishikawa, Y., Kojima, T., Osana, Y., Funahashi, A., Hiroi, N., Shibata, Y., Yamada, H., Kitano, H. & Amano, H., 2007 12 1, ICFPT 2007 - International Conference on Field Programmable Technology. p. 193-200 8 p. 4439249. (ICFPT 2007 - International Conference on Field Programmable Technology).

研究成果: Conference contribution

1 引用 (Scopus)

A framework for ODE-based multimodel biochemical simulations on an FPGA

Osana, Y., Fukushima, T., Yoshimi, M., Iwaoka, Y., Funahashi, A., Hiroi, N., Shibata, Y., Iwanaga, N., Kitano, H. & Amano, H., 2005 12 1, Proceedings - 2005 International Conference on Field Programmable Logic and Applications, FPL. p. 574-577 4 p. 1515788. (Proceedings - 2005 International Conference on Field Programmable Logic and Applications, FPL; 巻数 2005).

研究成果: Conference contribution

3 引用 (Scopus)
9 引用 (Scopus)
85 引用 (Scopus)

Age-related differences in cognitive function for interlimb coordination during split-belt walking: A pilot study

Saito, M., Hyodo, M., Masakado, Y., Tomita, Y. & Ushiba, J., 2013 2 20, : : Somatosensory and Motor Research. 30, 1, p. 56-63 8 p.

研究成果: Article

3 引用 (Scopus)

Age-Related Shifts in Brain Activity Dynamics during Task Switching

Jimura, K. & Braver, T. S., 2010 6 3, : : Cerebral Cortex. 20, 6, p. 1420-1431 12 p.

研究成果: Article

78 引用 (Scopus)
5 引用 (Scopus)

Albumin transport across the endothelial cells under the shear stress applied

Tsuzaka, M., Takenouchi, M., Ikeda, M., Oka, K. & Tanishita, K., 1999 12 1, American Society of Mechanical Engineers, Bioengineering Division (Publication) BED. ASME, 巻 42. p. 293-294 2 p.

研究成果: Conference contribution

1 引用 (Scopus)

Albumin uptake into endothelial cells in separated flow

Kudo, S., Yamaguchi, R., Sato, M., Oka, K. & Tanishita, K., 2000 12 1, : : American Society of Mechanical Engineers, Bioengineering Division (Publication) BED. 48, p. 83-84 2 p.

研究成果: Article

Algebraic method for the analysis of signaling crosstalk

Matsubara, Y., Kikuchi, S., Sugimoto, M., Oka, K. & Tomita, M., 2008 12 1, : : Artificial Life. 14, 1, p. 81-94 14 p.

研究成果: Article

4 引用 (Scopus)
9 引用 (Scopus)
7 引用 (Scopus)
2 引用 (Scopus)

A method for selective ablation of neurons in C. elegans using the phototoxic fluorescent protein, KillerRed

Kobayashi, J., Shidara, H., Morisawa, Y., Kawakami, M., Tanahashi, Y., Hotta, K. & Oka, K., 2013 8 26, : : Neuroscience Letters. 548, p. 261-264 4 p.

研究成果: Article

23 引用 (Scopus)

A modular approach to heterogeneous biochemical model simulation on an FPGA

Yamada, H., Osana, Y., Ishimori, T., Ooya, T., Yoshimi, M., Nishikawa, Y., Funahashi, A., Hiroi, N., Amano, H., Shibata, Y. & Oguri, K., 2009 12 1, ReConFig'09 - 2009 International Conference on ReConFigurable Computing and FPGAs. p. 125-130 6 p. 5382039. (ReConFig'09 - 2009 International Conference on ReConFigurable Computing and FPGAs).

研究成果: Conference contribution

1 引用 (Scopus)

AMPA glutamate receptors are required for sensory-organ formation and morphogenesis in the basal chordate

Hirai, S., Hotta, K., Kubo, Y., Nishino, A., Okabe, S., Okamura, Y. & Okado, H., 2017 4 11, : : Proceedings of the National Academy of Sciences of the United States of America. 114, 15, p. 3939-3944 6 p.

研究成果: Article

5 引用 (Scopus)

Amyloid- fibrils assembled on ganglioside-enriched membranes contain both parallel -sheets and turns

Matsubara, T., Yasumori, H., Ito, K., Shimoaka, T., Hasegawa, T. & Sato, T., 2018 9 7, : : Journal of Biological Chemistry. 293, 36, p. 14146-14154 9 p.

研究成果: Article

8 引用 (Scopus)

An accessibility-incorporated method for accurate prediction of RNA-RNA interactions from sequence data

Kato, Y., Mori, T., Sato, K., Maegawa, S., Hosokawa, H. & Akutsu, T., 2017 1 15, : : Bioinformatics. 33, 2, p. 202-209 8 p.

研究成果: Article

2 引用 (Scopus)
7 引用 (Scopus)

An Anilinoquinazoline Derivative Inhibits Tumor Growth through Interaction with hCAP-G2, a Subunit of Condensin II

Shiheido, H., Naito, Y., Kimura, H., Genma, H., Takashima, H., Tokunaga, M., Ono, T., Hirano, T., Du, W., Yamada, T., Doi, N., Iijima, S., Hattori, Y. & Yanagawa, H., 2012 9 13, : : PloS one. 7, 9, e44889.

研究成果: Article

10 引用 (Scopus)