生命情報学科

研究成果

2015

STD-NMR-Based Protein Engineering of the Unique Arylpropionate-Racemase AMDase G74C

Gaßmeyer, S. K., Yoshikawa, H., Enoki, J., Hülsemann, N., Stoll, R., Miyamoto, K. & Kourist, R., 2015 9 1, : : ChemBioChem. 16, 13, p. 1943-1949 7 p.

研究成果: Article

9 引用 (Scopus)

Substrate specificity of an esterase from the archaeon Sulfolobus tokodaii bearing a GGG(A)X motif

Wada, R., Ozaki, M., Kumon, T., Ohta, H. & Miyamoto, K., 2015 5 4, : : Biocatalysis and Biotransformation. 33, 3, p. 188-190 3 p.

研究成果: Article

1 引用 (Scopus)

The principles of whole-cell modeling

Karr, J. R., Takahashi, K. & Funahashi, A., 2015 10 1, : : Current Opinion in Microbiology. 27, p. 18-24 7 p.

研究成果: Article

28 引用 (Scopus)

Transcranial direct current stimulation enhances mu rhythm desynchronization during motor imagery that depends on handedness

Kasuga, S., Matsushika, Y., Kasashima-Shindo, Y., Kamatani, D., Fujiwara, T., Liu, M. & Ushiba, J., 2015 7 4, : : Laterality. 20, 4, p. 453-468 16 p.

研究成果: Article

6 引用 (Scopus)

Whole-genome sequencing and comparative genome analysis of bacillus subtilis strains isolated from non-salted fermented soybean foods

Kamada, M., Hase, S., Fujii, K., Miyake, M., Sato, K., Kimura, K. & Sakakibara, Y., 2015 10 27, : : PloS one. 10, 10, e0141369.

研究成果: Article

15 引用 (Scopus)
2014

3466-3476 Chromomycins a2and a3from marine actinomycetes with TRAIL resistance-overcoming and wnt signal inhibitory activities

Toume, K., Tsukahara, K., Ito, H., Arai, M. A. & Ishibashi, M., 2014 6, : : Marine Drugs. 12, 6, p. 3466-3476 11 p.

研究成果: Article

公開
18 引用 (Scopus)

5-Lipoxygenase and cysteinyl leukotriene receptor 1 regulate epidermal growth factor-induced cell migration through Tiam1 upregulation and Rac1 activation

Magi, S., Takemoto, Y., Kobayashi, H., Kasamatsu, M., Akita, T., Tanaka, A., Takano, K., Tashiro, E., Igarashi, Y. & Imoto, M., 2014 3, : : Cancer science. 105, 3, p. 290-296 7 p.

研究成果: Article

19 引用 (Scopus)
1 引用 (Scopus)

A task-oriented brain-computer interface rehabilitation system for patients with stroke hemiplegia

Ushiba, J., Morishita, A. & Maeda, T., 2014 10 22, 2014 4th International Conference on Wireless Communications, Vehicular Technology, Information Theory and Aerospace and Electronic Systems, VITAE 2014 - Co-located with Global Wireless Summit. Institute of Electrical and Electronics Engineers Inc., 6934416. (2014 4th International Conference on Wireless Communications, Vehicular Technology, Information Theory and Aerospace and Electronic Systems, VITAE 2014 - Co-located with Global Wireless Summit).

研究成果: Conference contribution

4 引用 (Scopus)

Chemical genomic-based pathway analyses for epidermal growth factor-mediated signaling in migrating cancer cells

Magi, S., Saeki, Y., Kasamatsu, M., Tashiro, E. & Imoto, M., 2014 5 12, : : PloS one. 9, 5, e96776.

研究成果: Article

6 引用 (Scopus)
6 引用 (Scopus)

Conversion of a chaperonin GroEL-independent protein into an obligate substrate

Ishimoto, T., Fujiwara, K., Niwa, T. & Taguchi, H., 2014 11 14, : : Journal of Biological Chemistry. 289, 46, p. 32073-32080 8 p.

研究成果: Article

8 引用 (Scopus)

Decreased fronto-temporal interaction during fixation after memory retrieval

Katsura, M., Hirose, S., Sasaki, H., Mori, H., Kunimatsu, A., Ohtomo, K., Jimura, K. & Konishi, S., 2014 10 23, : : PloS one. 9, 10, e110798.

研究成果: Article

Design and synthesis of a FlAsH-type Mg2+ fluorescent probe for specific protein labeling

Fujii, T., Shindo, Y., Hotta, K., Citterio, D., Nishiyama, S., Suzuki, K. & Oka, K., 2014 2 12, : : Journal of the American Chemical Society. 136, 6, p. 2374-2381 8 p.

研究成果: Article

46 引用 (Scopus)
7 引用 (Scopus)

Draft genome sequence of Kozakia baliensis SR-745, the first sequenced Kozakia strain from the family Acetobacteraceae

Schmid, J., Koenig, S., Pick, A., Steffler, F., Yoshida, S., Miyamoto, K. & Sieber, V., 2014 1 1, : : Genome Announcements. 2, 3, e00594-14.

研究成果: Article

1 引用 (Scopus)
4 引用 (Scopus)

Efficacy of brain-computer interface-driven neuromuscular electrical stimulation for chronic paresis after stroke

Mukaino, M., Ono, T., Shindo, K., Fujiwara, T., Ota, T., Kimura, A., Liu, M. & Ushiba, J., 2014 1 1, : : Journal of rehabilitation medicine. 46, 4, p. 378-382 5 p.

研究成果: Article

公開
49 引用 (Scopus)

Enzymatic decarboxylation-An emerging reaction for chemicals production from renewable resources

Kourist, R., Guterl, J. K., Miyamoto, K. & Sieber, V., 2014 3 1, : : ChemCatChem. 6, 3, p. 689-701 13 p.

研究成果: Review article

33 引用 (Scopus)

Event-related desynchronization by hand motor imagery is associated with corticospinal excitability: Physiological evidence for BCI based neurorehabilitation

Takemi, M., Masakado, Y., Liu, M. & Ushiba, J., 2014, Biosystems and Biorobotics. Springer International Publishing, 巻 6. p. 85-94 10 p. (Biosystems and Biorobotics; 巻数 6).

研究成果: Chapter

2 引用 (Scopus)

Expression of Nephrin homologue in the freshwater planarian, Dugesia japonica

Nakamura, T., Takagi, S., Matsumoto, M., Tashiro, F., Sakai, T. & Ichimura, K., 2014, : : Acta Histochemica et Cytochemica. 47, 6, p. 303-310 8 p.

研究成果: Article

3 引用 (Scopus)

Fabrication method to a high resolution control in the space of cell culturing environment with microfluidic system

Hiraiwa, T., Kimura, T., Takenaka, Y., Tanamoto, R., Ota, H., Kimura, H., Taguchi, Y., Miki, N., Matsumoto, Y., Oka, K., Funahashi, A. & Hiroi, N., 2014 1 1, MEMS 2014 - 27th IEEE International Conference on Micro Electro Mechanical Systems. Institute of Electrical and Electronics Engineers Inc., p. 264-267 4 p. 6765626. (Proceedings of the IEEE International Conference on Micro Electro Mechanical Systems (MEMS)).

研究成果: Conference contribution

Functional recovery from chronic writer's cramp by brain-computer interface rehabilitation: A case report

Hashimoto, Y., Ota, T., Mukaino, M., Liu, M. & Ushiba, J., 2014, : : BMC Neuroscience. 15, 1, 103.

研究成果: Article

6 引用 (Scopus)

Identification of licopyranocoumarin and glycyrurol from herbal medicines as neuroprotective compounds for Parkinson's disease

Fujimaki, T., Saiki, S., Tashiro, E., Yamada, D., Kitagawa, M., Hattori, N. & Imoto, M., 2014 6 24, : : PloS one. 9, 6, e100395.

研究成果: Article

10 引用 (Scopus)

Identification of oscillatory firing neurons associated with locomotion in the earthworm through synapse imaging

Shimoi, T., Mizutani, K., Kojima, D., Kitamura, Y., Hotta, K., Ogawa, H. & Oka, K., 2014 5 30, : : Neuroscience. 268, p. 149-158 10 p.

研究成果: Article

Introducing micrometer-sized artificial objects into live cells: A method for cell-giant unilamellar vesicle electrofusion

Saito, A. C., Ogura, T., Fujiwara, K., Murata, S. & Nomura, S. I. M., 2014 9 17, : : PloS one. 9, 9, e106853.

研究成果: Review article

15 引用 (Scopus)

Meis1 regulates epidermal stem cells and is required for skin tumorigenesis

Okumura, K., Saito, M., Isogai, E., Aoto, Y., Hachiya, T., Sakakibara, Y., Katsuragi, Y., Hirose, S., Kominami, R., Goitsuka, R., Nakamura, T. & Wakabayashi, Y., 2014 7 11, : : PloS one. 9, 7, e102111.

研究成果: Article

15 引用 (Scopus)

Multimodal Sensory Feedback Associated with Motor Attempts Alters BOLD Responses to Paralyzed Hand Movement in Chronic Stroke Patients

Ono, T., Tomita, Y., Inose, M., Ota, T., Kimura, A., Liu, M. & Ushiba, J., 2014, : : Brain Topography. 28, 2, p. 340-351 12 p.

研究成果: Article

16 引用 (Scopus)
15 引用 (Scopus)

Neovessel formation promotes liver fibrosis via providing latent transforming growth factor-β

Sakata, K., Eda, S., Lee, E. S., Hara, M., Imoto, M. & Kojima, S., 2014 1 17, : : Biochemical and Biophysical Research Communications. 443, 3, p. 950-956 7 p.

研究成果: Article

22 引用 (Scopus)

Ontology for the asexual development and anatomy of the colonial chordate botryllus schlosseri

Manni, L., Gasparini, F., Hotta, K., Ishizuka, K. J., Ricci, L., Tiozzo, S., Voskoboynik, A. & Dauga, D., 2014 5 1, : : PloS one. 9, 5, e96434.

研究成果: Article

24 引用 (Scopus)
23 引用 (Scopus)

Physalin H from Solanum nigrum as an Hh signaling inhibitor blocks GLI1-DNA-complex formation

Arai, M. A., Uchida, K., Sadhu, S. K., Ahmed, F. & Ishibashi, M., 2014 1 13, : : Beilstein Journal of Organic Chemistry. 10, p. 134-140 7 p.

研究成果: Article

公開
21 引用 (Scopus)

Planarian D-amino acid oxidase is involved in ovarian development during sexual induction

Maezawa, T., Tanaka, H., Nakagawa, H., Ono, M., Aoki, M., Matsumoto, M., Ishida, T., Horiike, K. & Kobayashi, K., 2014 5, : : Mechanisms of Development. 132, 1, p. 69-78 10 p.

研究成果: Article

10 引用 (Scopus)
7 引用 (Scopus)

Structural basis for inhibition of the MDM2:p53 interaction by an optimized MDM2-binding peptide selected with mRNA Display

Nagata, T., Shirakawa, K., Kobayashi, N., Shiheido, H., Tabata, N., Sakuma-Yonemura, Y., Horisawa, K., Katahira, M., Doi, N. & Yanagawa, H., 2014 10 2, : : PloS one. 9, 10, e109163.

研究成果: Article

8 引用 (Scopus)

Synthesis and influenza virus inhibitory activities of carbosilane dendrimers peripherally functionalized with hemagglutinin-binding peptide

Hatano, K., Matsubara, T., Muramatsu, Y., Ezure, M., Koyama, T., Matsuoka, K., Kuriyama, R., Kori, H. & Sato, T., 2014 10 23, : : Journal of Medicinal Chemistry. 57, 20, p. 8332-8339 8 p.

研究成果: Article

27 引用 (Scopus)

The neural basis of task switching changes with skill acquisition

Jimura, K., Cazalis, F., Stover, E. R. S. & Poldrack, R. A., 2014 5 22, : : Frontiers in Human Neuroscience. 8, MAY, 339.

研究成果: Article

14 引用 (Scopus)

The rapid synthesis of cell-sized liposomes by centrifuge-based microfluidic device

Morita, M., Onoe, H., Yanagisawa, M., Fujiwara, K., Saito, H. & Takinoue, M., 2014, 18th International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2014. Chemical and Biological Microsystems Society, p. 336-338 3 p.

研究成果: Conference contribution

Three-dimensional culture using human plasma-medium gel with fragmin/protamine microparticles for proliferation of various human cells

Kishimoto, S., Ishihara, M., Takikawa, M., Takikawa, M., Sumi, Y., Nakamura, S., Fujita, M., Sato, T. & Kiyosawa, T., 2014 10 1, : : Cytotechnology. 66, 5, p. 791-802 12 p.

研究成果: Article

4 引用 (Scopus)

Three-dimensional motion analysis of arm-reaching movements in healthy and hemispinalized common marmosets

Takemi, M., Kondo, T., Yoshino-Saito, K., Sekiguchi, T., Kosugi, A., Kasuga, S., Okano, H. J., Okano, H. & Ushiba, J., 2014 9 22, : : Behavioural Brain Research. 275, p. 259-268 10 p.

研究成果: Article

8 引用 (Scopus)

Toward high-throughput screening of NAD(P)-dependent oxidoreductases using boron-doped diamond microelectrodes and microfluidic devices

Oyobiki, R., Kato, T., Katayama, M., Sugitani, A., Watanabe, T., Einaga, Y., Matsumoto, Y., Horisawa, K. & Doi, N., 2014 10 7, : : Analytical chemistry. 86, 19, p. 9570-9575 6 p.

研究成果: Article

17 引用 (Scopus)
5 引用 (Scopus)

Ubiquinone-rhodol (UQ-Rh) for fluorescence imaging of NAD(P)H through intracellular activation

Komatsu, H., Shindo, Y., Oka, K., Hill, J. P. & Ariga, K., 2014 4 7, : : Angewandte Chemie - International Edition. 53, 15, p. 3993-3995 3 p.

研究成果: Article

41 引用 (Scopus)

Whole genome complete resequencing of Bacillus subtilis natto by combining long reads with high-quality short reads

Kamada, M., Hase, S., Sato, K., Toyoda, A., Fujiyama, A. & Sakakibara, Y., 2014 10 16, : : PloS one. 9, 10, e109999.

研究成果: Article

25 引用 (Scopus)

Xanthohumol suppresses oestrogen-signalling in breast cancer through the inhibition of BIG3-PHB2 interactions

Yoshimaru, T., Komatsu, M., Tashiro, E., Imoto, M., Osada, H., Miyoshi, Y., Honda, J., Sasa, M. & Katagiri, T., 2014 12 8, : : Scientific reports. 4, 7355.

研究成果: Article

39 引用 (Scopus)
2013

A bicyclic 1-deoxygalactonojirimycin derivative as a novel pharmacological chaperone for GM1 gangliosidosis

Takai, T., Higaki, K., Aguilar-Moncayo, M., Mena-Barragán, T., Hirano, Y., Yura, K., Yu, L., Ninomiya, H., García-Moreno, M. I., Sakakibara, Y., Ohno, K., Nanba, E., Ortiz Mellet, C., García Fernández, J. M. & Suzuki, Y., 2013 3, : : Molecular Therapy. 21, 3, p. 526-532 7 p.

研究成果: Article

48 引用 (Scopus)

Age-related differences in cognitive function for interlimb coordination during split-belt walking: A pilot study

Saito, M., Hyodo, M., Masakado, Y., Tomita, Y. & Ushiba, J., 2013 2 20, : : Somatosensory and Motor Research. 30, 1, p. 56-63 8 p.

研究成果: Article

3 引用 (Scopus)

A method for selective ablation of neurons in C. elegans using the phototoxic fluorescent protein, KillerRed

Kobayashi, J., Shidara, H., Morisawa, Y., Kawakami, M., Tanahashi, Y., Hotta, K. & Oka, K., 2013 8 26, : : Neuroscience Letters. 548, p. 261-264 4 p.

研究成果: Article

23 引用 (Scopus)