生命情報学科

研究成果

2012

The comparison of motor learning performance with and without feedback

Orand, A., Ushiba, J., Tomita, Y. & Honda, S., 2012 9 1, : : Somatosensory and Motor Research. 29, 3, p. 103-110 8 p.

研究成果: Article

6 引用 (Scopus)

The correlation between motor impairments and event-related desynchronization during motor imagery in ALS patients

Kasahara, T., Terasaki, K., Ogawa, Y., Ushiba, J., Aramaki, H. & Masakado, Y., 2012 6 15, : : BMC Neuroscience. 13, 1, 66.

研究成果: Article

19 引用 (Scopus)
14 引用 (Scopus)

The effects of coating pDNA/chitosan complexes with chondroitin sulfate on physicochemical characteristics and cell transfection

Hagiwara, K., Nakata, M., Koyama, Y. & Sato, T., 2012 10 1, : : Biomaterials. 33, 29, p. 7251-7260 10 p.

研究成果: Article

34 引用 (Scopus)

Three-dimensional anatomy of the Ciona intestinalis tailbud embryo at single-cell resolution

Nakamura, M. J., Terai, J., Okubo, R., Hotta, K. & Oka, K., 2012 12 15, : : Developmental Biology. 372, 2, p. 274-284 11 p.

研究成果: Article

27 引用 (Scopus)

Three-dimensional expansion using plasma-medium gel with fragmin/protamine nanoparticles and FGF-2 to stimulate adipose-derived stromal cells and bone marrow-derived mesenchymal stem cells

Kishimoto, S., Ishihara, M., Mori, Y., Takikawa, M., Sumi, Y., Nakamura, S., Sato, T. & Kiyosawa, T., 2012 12 1, : : BioResearch Open Access. 1, 6, p. 314-323 10 p.

研究成果: Article

8 引用 (Scopus)

Tuning glycosidase inhibition through aglycone interactions: Pharmacological chaperones for Fabry disease and GM1 gangliosidosis

Aguilar-Moncayo, M., Takai, T., Higaki, K., Mena-Barragán, T., Hirano, Y., Yura, K., Li, L., Yu, Y., Ninomiya, H., García-Moreno, M. I., Ishii, S., Sakakibara, Y., Ohno, K., Nanba, E., Ortiz Mellet, C., García Fernández, J. M. & Suzuki, Y., 2012 6 6, : : Chemical Communications. 48, 52, p. 6514-6516 3 p.

研究成果: Article

42 引用 (Scopus)

Xanthohumol impairs autophagosome maturation through direct inhibition of valosin-containing protein

Sasazawa, Y., Kanagaki, S., Tashiro, E., Nogawa, T., Muroi, M., Kondoh, Y., Osada, H. & Imoto, M., 2012 5 18, : : ACS chemical biology. 7, 5, p. 892-900 9 p.

研究成果: Article

42 引用 (Scopus)
2011

Accelerated biosynthesis of neolacto-series glycosphingolipids in differentiated mouse embryonal carcinoma F9 cells detected by using dodecyl N-acetylglucosaminide as a saccharide primer

Ogasawara, N., Katagiri, Y. U., Kiyokawa, N., Kaneko, T., Sato, B., Nakajima, H., Miyagawa, Y., Kushi, Y., Ishida, H., Kiso, M., Okita, H., Sato, T. & Fujimoto, J., 2011 3 1, : : Journal of biochemistry. 149, 3, p. 321-330 10 p.

研究成果: Article

6 引用 (Scopus)

A near-infrared fluorescent calcium probe: A new tool for intracellular multicolour Ca2+ imaging

Matsui, A., Umezawa, K., Shindo, Y., Fujii, T., Citterio, D., Oka, K. & Suzuki, K., 2011 10 7, : : Chemical Communications. 47, 37, p. 10407-10409 3 p.

研究成果: Article

73 引用 (Scopus)

A new, convenient cell-based screening method for small-molecule glycolytic inhibitors

Kitagawa, M., Misawa, M., Ogawa, S., Tashiro, E. & Imoto, M., 2011 3 7, : : Bioscience, Biotechnology and Biochemistry. 75, 2, p. 367-369 3 p.

研究成果: Article

4 引用 (Scopus)

A sensory feedback system utilizing cutaneous electrical stimulation for stroke patients with sensory loss

Kita, K., Takeda, K., Osu, R., Sakata, S., Otaka, Y. & Ushiba, J., 2011 11 2, 2011 IEEE International Conference on Rehabilitation Robotics, ICORR 2011 - Rehab Week Zurich 2011. 5975489. (IEEE International Conference on Rehabilitation Robotics).

研究成果: Conference contribution

2 引用 (Scopus)
39 引用 (Scopus)

Biocatalytic strategies for the asymmetric synthesis of profens – recent trends and developments

Kourist, R., Domínguez de María, P. & Miyamoto, K., 2011 1 10, : : Green Chemistry. 13, 10, p. 2607-2618 12 p.

研究成果: Article

45 引用 (Scopus)

BioPAX support in CellDesigner

Mi, H., Muruganujan, A., Demir, E., Matsuoka, Y., Funahashi, A., Kitano, H. & Thomas, P. D., 2011 12 1, : : Bioinformatics. 27, 24, p. 3437-3438 2 p., btr586.

研究成果: Article

13 引用 (Scopus)

Caffeine induces apoptosis by enhancement of autophagy via PI3K/Akt/mTOR/p70S6K inhibition

Saiki, S., Sasazawa, Y., Imamichi, Y., Kawajiri, S., Fujimaki, T., Tanida, I., Kobayashi, H., Sato, F., Sato, S., Ishikawa, K. I., Imoto, M. & Hattori, N., 2011 2, : : Autophagy. 7, 2, p. 176-187 12 p.

研究成果: Article

273 引用 (Scopus)

Chemical chaperone therapy: Chaperone effect on mutant enzyme and cellular pathophysiology in β-galactosidase deficiency

Higaki, K., Li, L., Bahrudin, U., Okuzawa, S., Takamuram, A., Yamamoto, K., Adachi, K., Paraguison, R. C., Takai, T., Ikehata, H., Tominaga, L., Hisatome, I., Iida, M., Ogawa, S., Matsuda, J., Ninomiya, H., Sakakibara, Y., Ohno, K., Suzuki, Y. & Nanba, E., 2011 7 1, : : Human mutation. 32, 7, p. 843-852 10 p.

研究成果: Article

37 引用 (Scopus)
7 引用 (Scopus)

CIPRO 2.5: Ciona intestinalis protein database, a unique integrated repository of large-scale omics data, bioinformatic analyses and curated annotation, with user rating and reviewing functionality

Endo, T., Ueno, K., Yonezawa, K., Mineta, K., Hotta, K., Satou, Y., Yamada, L., Ogasawara, M., Takahashi, H., Nakajima, A., Nakachi, M., Nomura, M., Yaguchi, J., Sasakura, Y., Yamasaki, C., Sera, M., Yoshizawa, A. C., Imanishi, T., Taniguchi, H. & Inaba, K., 2011 1 1, : : Nucleic acids research. 39, SUPPL. 1, p. D807-D814

研究成果: Article

25 引用 (Scopus)
13 引用 (Scopus)
21 引用 (Scopus)

Effects of 17β-estradiol and bisphenol a on the formation of reproductive organs in planarians

Miyashita, H., Nakagawa, H., Kobayashi, K., Hoshi, M. & Matsumoto, M., 2011 2, : : Biological Bulletin. 220, 1, p. 47-56 10 p.

研究成果: Article

6 引用 (Scopus)
136 引用 (Scopus)

Engineering the promiscuous racemase activity of an arylmalonate decarboxylase

Kourist, R., Miyauchi, Y., Uemura, D. & Miyamoto, K., 2011 1 10, : : Chemistry - A European Journal. 17, 2, p. 557-563 7 p.

研究成果: Article

22 引用 (Scopus)
9 引用 (Scopus)

Fragmin/protamine microparticles (F/P MPs) as cell carriers enhance the formation and growth of tumors In Vivo

Kumano, I., Kishimoto, S., Nakamura, S., Hattori, H., Tanaka, Y., Nakata, M., Sato, T., Fujita, M., Maehara, T. & Ishihara, M., 2011 9 1, : : Cellular and Molecular Bioengineering. 4, 3, p. 476-483 8 p.

研究成果: Article

4 引用 (Scopus)

Ganglioside GD1a negatively regulates hepatocyte growth factor expression through caveolin-1 at the transcriptional level in murine osteosarcoma cells

Zhang, L., Wang, Y., Wang, L., Cao, T., Hyuga, S., Sato, T., Wu, Y., Yamagata, S. & Yamagata, T., 2011 8 1, : : Biochimica et Biophysica Acta - General Subjects. 1810, 8, p. 759-768 10 p.

研究成果: Article

6 引用 (Scopus)

Generation of 'Unnatural Natural Product' library and identification of a small molecule inhibitor of XIAP

Kawamura, T., Matsubara, K., Otaka, H., Tashiro, E., Shindo, K., Yanagita, R. C., Irie, K. & Imoto, M., 2011 7 15, : : Bioorganic and Medicinal Chemistry. 19, 14, p. 4377-4385 9 p.

研究成果: Article

22 引用 (Scopus)

GM3 suppresses anchorage-independent growth via Rho GDP dissociation inhibitor beta in melanoma B16 cells

Wang, P., Xu, S., Wang, Y., Wu, P., Zhang, J., Sato, T., Yamagata, S. & Yamagata, T., 2011 8 1, : : Cancer science. 102, 8, p. 1476-1485 10 p.

研究成果: Article

5 引用 (Scopus)

High Solubility of Random-Sequence Proteins Consisting of Five Kinds of Primitive Amino Acids

Doi, N., Kakukawa, K., Oishi, Y. & Yanagawa, H., 2011 2 14, Chemical Synthetic Biology. John Wiley and Sons, p. 119-137 19 p.

研究成果: Chapter

34 引用 (Scopus)

Involvement of 14-3-3 proteins in the second epidermal growth factor-induced wave of Rac1 activation in the process of cell migration

Kobayashi, H., Ogura, Y., Sawada, M., Nakayama, R., Takano, K., Minato, Y., Takemoto, Y., Tashiro, E., Watanabe, H. & Imoto, M., 2011 11 11, : : Journal of Biological Chemistry. 286, 45, p. 39259-39268 10 p.

研究成果: Article

31 引用 (Scopus)

IPknot: Fast and accurate prediction of RNA secondary structures with pseudoknots using integer programming

Sato, K., Kato, Y., Hamada, M., Akutsu, T. & Asai, K., 2011 7, : : Bioinformatics. 27, 13, p. i85-i93 btr215.

研究成果: Article

101 引用 (Scopus)

MetaVelvet: AAAn extension of Velvet assembler to de novo metagenome assembly from short sequence reads

Namiki, T., Hachiya, T., Tanaka, H. & Sakakibara, Y., 2011 12 1, 2011 ACM Conference on Bioinformatics, Computational Biology and Biomedicine, BCB 2011. p. 116-124 9 p. (2011 ACM Conference on Bioinformatics, Computational Biology and Biomedicine, BCB 2011).

研究成果: Conference contribution

13 引用 (Scopus)
10 引用 (Scopus)

Molecular design, chemical synthesis, and biological evaluation of agents that selectively photo-degrade the transcription factor estrogen receptor-α

Tsumura, K., Suzuki, A., Tsuzuki, T., Tanimoto, S., Kaneko, H., Matsumura, S., Imoto, M., Umezawa, K., Takahashi, D. & Toshima, K., 2011 9 21, : : Organic and Biomolecular Chemistry. 9, 18, p. 6357-6366 10 p.

研究成果: Article

11 引用 (Scopus)

mRNA display selection of an optimized MDM2-binding peptide that potently inhibits MDM2-p53 interaction

Shiheido, H., Takashima, H., Doi, N. & Yanagawa, H., 2011 3 21, : : PloS one. 6, 3, e17898.

研究成果: Article

18 引用 (Scopus)
34 引用 (Scopus)

Mycotrienin II, a translation inhibitor that prevents ICAM-1 expression induced by pro-inflammatory cytokines

Yamada, Y., Tashiro, E., Taketani, S., Imoto, M. & Kataoka, T., 2011 5 1, : : Journal of Antibiotics. 64, 5, p. 361-366 6 p.

研究成果: Article

10 引用 (Scopus)

Newly developed Mg2+-selective fluorescent probe enables visualization of Mg2+ dynamics in mitochondria

Shindo, Y., Fujii, T., Komatsu, H., Citterio, D., Hotta, K., Suzuki, K. & Oka, K., 2011, : : PloS one. 6, 8, e23684.

研究成果: Article

41 引用 (Scopus)

Novel conserved structural domains of acrosome reaction-inducing substance are widespread in invertebrates

Naruse, M., Ishikawa, R., Sakaya, H., Moriyama, H., Hoshi, M. & Matsumoto, M., 2011 1 1, : : Molecular reproduction and development. 78, 1, p. 57-66 10 p.

研究成果: Article

6 引用 (Scopus)

Peptidomic analysis of the central nervous system of the protochordate, Ciona intestinalis: Homologs and prototypes of vertebrate peptides and novel peptides

Kawada, T., Ogasawara, M., Sekiguchi, T., Aoyama, M., Hotta, K., Oka, K. & Satake, H., 2011 6, : : Endocrinology. 152, 6, p. 2416-2427 12 p.

研究成果: Article

27 引用 (Scopus)

Physicochemical properties of pDNA/chitosan complexes as gene delivery systems

Hagiwara, K., Anastasia, R., Nakata, M. & Sato, T., 2011 12 1, : : Current Drug Discovery Technologies. 8, 4, p. 329-339 11 p.

研究成果: Article

3 引用 (Scopus)

Physiological environment induces quick response - slow exhaustion reactions

Hiroi, N., Lu, J., Iba, K., Tabira, A., Yamashita, S., Okada, Y., Flamm, C., Oka, K., Köhler, G. & Funahashi, A., 2011, : : Frontiers in Physiology. 2 SEP, Article 50.

研究成果: Article

8 引用 (Scopus)

Positive afferent feedback to the human soleus muscle during quiet standing

van Doornik, J., Azevedo Coste, C., Ushiba, J. & Sinkjær, T., 2011 5 1, : : Muscle and Nerve. 43, 5, p. 726-732 7 p.

研究成果: Article

5 引用 (Scopus)

Quinotrierixin inhibited ER stress-induced XBPl mRNA splicing through inhibition of protein synthesis

Yamamoto, K., Tashiro, E. & Imoto, M., 2011 3 7, : : Bioscience, Biotechnology and Biochemistry. 75, 2, p. 284-288 5 p.

研究成果: Article

10 引用 (Scopus)

Selective expansion of CD34+ cells from mouse bone marrow cultured on LH/P MP-coated plates with adequate cytokines

Kishimoto, S., Ishihara, M., Kanatani, Y., Nambu, M., Takikawa, M., Sumi, Y., Nakamura, S., Mori, Y., Hattori, H., Tanaka, Y. & Sato, T., 2011 12 1, : : Journal of Tissue Engineering. 2, 1, p. 1-8 8 p.

研究成果: Article

3 引用 (Scopus)