生命情報学科

2004

Directional sensitivity of dendritic calcium responses to wind stimuli in the cricket giant interneuron

Ogawa, H., Baba, Y. & Oka, K., 2004 4月 1, In: Neuroscience Letters. 358, 3, p. 185-188 4 p.

研究成果: Article › 査読

Display of azido glycoside on a sensor chip

Sato, T., Fujita, S., Kasuya, M. C. Z., Hatanaka, K. & Yamagata, T., 2004 5月 5, In: Chemistry Letters. 33, 5, p. 580-581 2 p.

研究成果: Article › 査読

8 被引用数 (Scopus)

DNA Display of Biologically Active Proteins for In Vitro Protein Selection

Yonezawa, M., Doi, N., Higashinakagawa, T. & Yanagawa, H., 2004 3月, In: Journal of biochemistry. 135, 3, p. 285-288 4 p.

研究成果: Article › 査読

30 被引用数 (Scopus)

Efficient oxidation of alcohols by a 2-phenylethanol-degrading Brevibacterium sp.

Miyamoto, K., Hirano, J. I. & Ohta, H., 2004 9月 1, In: Biotechnology Letters. 26, 17, p. 1385-1388 4 p.

研究成果: Article › 査読

8 被引用数 (Scopus)

Fluorous-tagged compound: A viable scaffold to prime oligosaccharide synthesis by cellular enzymes

Kasuya, M. C. Z., Cusi, R., Ishihara, O., Miyagawa, A., Hashimoto, K., Sato, T. & Hatanaka, K., 2004 4月 9, In: Biochemical and Biophysical Research Communications. 316, 3, p. 599-604 6 p.

研究成果: Article › 査読

26 被引用数 (Scopus)

Guanylyl cyclase and cGMP-specific phosphodiesterase participate in the acrosome reaction of starfish sperm

Kawase, O., Ueno, S., Minakata, H., Hoshi, M. & Matsumoto, M., 2004 11月, In: Zygote. 12, 4, p. 345-355 11 p.

研究成果: Article › 査読

5 被引用数 (Scopus)

Integration-plot test for peri-stimulus time histograms in human motor units

Ushiba, J., Honda, S., Onishi, Y., Tomita, Y. & Masakado, Y., 2004 3月, In: Medical and Biological Engineering and Computing. 42, 2, p. 264-271 8 p.

研究成果: Article › 査読

1 被引用数 (Scopus)

Investigation of Intracellular Magnesium Mobilization Pathways I Pc12 Cells B Simultaneous Mg-Ca Fluorescent Imaging

Kubota, T., Kitamura, Y., Oka, K., Shindo, Y., Tokuno, K., Suzuki, K., Komatsu, H., Ogawa, H., Kitamura, Y. & Oka, K., 2004 12月 1, In: Journal of the American College of Nutrition. 23, 6, p. 742S-744S

研究成果: Article › 査読

3 被引用数 (Scopus)

In vitro selection of Jun-associated proteins using mRNA display.

Horisawa, K., Tateyama, S., Ishizaka, M., Matsumura, N., Takashima, H., Miyamoto-Sato, E., Doi, N. & Yanagawa, H., 2004, In: Nucleic acids research. 32, 21, p. e169

研究成果: Article › 査読

Open Access

47 被引用数 (Scopus)

In vitro selection of restriction endonucleases by in vitro compartmentalization.

Doi, N., Kumadaki, S., Oishi, Y., Matsumura, N. & Yanagawa, H., 2004, In: Nucleic acids research. 32, 12, p. e95

研究成果: Article › 査読

Open Access

41 被引用数 (Scopus)

In vitro translation-based computations

Sakakibara, Y. & Hohsaka, T., 2004, In: Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 2943, p. 197-202 6 p.

研究成果: Article › 査読

3 被引用数 (Scopus)

In vivo nitric oxide measurements using a microcoaxial electrode.

Kitamura, Y., Kobayashi, H., Tanishita, K. & Oka, K., 2004, In: Methods in molecular biology (Clifton, N.J.). 279, p. 35-43 9 p.

研究成果: Article › 査読

3 被引用数 (Scopus)

Mechanism of asymmetric decarboxylation of α-aryl-α- methylmalonate catalyzed by arylmalonate decarboxylase originated from Alcaligenes bronchisepticus

Matoishi, K., Ueda, M., Miyamoto, K. & Ohta, H., 2004 3月, In: Journal of Molecular Catalysis B: Enzymatic. 27, 4-6, p. 161-168 8 p.

研究成果: Article › 査読

34 被引用数 (Scopus)

Microbial deracemization of α-substituted carboxylic acids: Control of the reaction path

Kato, D. I., Miyamoto, K. & Ohta, H., 2004 9月 20, In: Tetrahedron Asymmetry. 15, 18, p. 2965-2973 9 p.

研究成果: Article › 査読

20 被引用数 (Scopus)

Modulation of motor patterns by sensory feedback during earthworm locomotion

Mizutani, K., Shimoi, T., Ogawa, H., Kitamura, Y. & Oka, K., 2004 4月, In: Neuroscience Research. 48, 4, p. 457-462 6 p.

研究成果: Article › 査読

8 被引用数 (Scopus)

Motor strategies for initiating downward-oriented movements during standing in adults

Hase, K., Sako, M., Ushiba, J. & Chino, N., 2004 9月, In: Experimental Brain Research. 158, 1, p. 18-27 10 p.

研究成果: Article › 査読

23 被引用数 (Scopus)

2003

A DNA-based computational model using a specific type of restriction enzyme

Sakakibara, Y. & Imai, H., 2003 12月 1, In: Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 2568, p. 315-325 11 p.

研究成果: Article › 査読

2 被引用数 (Scopus)

A sperm-activating peptide controls a cGMP-signaling pathway in starfish sperm

Matsumoto, M., Solzin, J., Helbig, A., Hagen, V., Ueno, S. I., Kawase, O., Maruyama, Y., Ogiso, M., Godde, M., Minakata, H., Kaupp, U. B., Hoshi, M. & Weyand, I., 2003 8月 15, In: Developmental Biology. 260, 2, p. 314-324 11 p.

研究成果: Article › 査読

82 被引用数 (Scopus)

Biochemical characterization of inner sugar chains of acrosome reaction-inducing substance in jelly coat of starfish eggs

Gunaratne, H. M. M. J., Yamagaki, T., Matsumoto, M. & Hoshi, M., 2003 8月 1, In: Glycobiology. 13, 8, p. 567-580 14 p.

研究成果: Article › 査読

16 被引用数 (Scopus)

Deletion of the BH1 domain of Bcl-2 accelerates apoptosis by acting in a dominant negative fashion

Kawatani, M. & Imoto, M., 2003 5月 30, In: Journal of Biological Chemistry. 278, 22, p. 19732-19742 11 p.

研究成果: Article › 査読

30 被引用数 (Scopus)

DNA-based algorithms for learning Boolean formulae

Sakakibara, Y., 2003, In: Natural Computing. 2, 2, p. 153-171 19 p.

研究成果: Article › 査読

4 被引用数 (Scopus)

DNA display for in vitro selection of diverse peptide libraries

Yonezawa, M., Doi, N., Kawahashi, Y., Higashinakagawa, T. & Yanagawa, H., 2003 10月 1, In: Nucleic acids research. 31, 19, p. e118

研究成果: Article › 査読

Open Access

82 被引用数 (Scopus)

Dual responses of tissue partial pressure of oxygen after functional stimulation in rat somatosensory cortex

Masamoto, K., Takizawa, N., Kobayashi, H., Oka, K. & Tanishita, K., 2003 7月 25, In: Brain Research. 979, 1-2, p. 104-113 10 p.

研究成果: Article › 査読

21 被引用数 (Scopus)

Effect of long-term shear stress exposure on calcium response and morphology of cultured endothelial cells

Kudo, S., Yamaguchi, R., Machida, K., Ikeda, M., Oka, K. & Tanishita, K., 2003 12月, In: JSME International Journal, Series C: Mechanical Systems, Machine Elements and Manufacturing. 46, 4, p. 1226-1233 8 p.

研究成果: Article › 査読

Open Access

3 被引用数 (Scopus)

Formula-Based Approach of Statistical Tests for Peri-Stimulus Time Histograms

Ushiba, J., Onishi, Y., Tomita, Y. & Masakado, Y., 2003 11月, In: IEEE Transactions on Biomedical Engineering. 50, 11, p. 1262-1267 6 p.

研究成果: Article › 査読

2 被引用数 (Scopus)

Gerfelin, a novel inhibitor of geranylgeranyl diphosphate synthase from Beauveria felina QN22047. I. Taxonomy, fermentation, isolation, and biological activities

Zenitani, S., Tashiro, S., Shindo, K., Nagai, K., Suzuki, K. & Imoto, M., 2003 8月 1, In: Journal of Antibiotics. 56, 7, p. 617-621 5 p.

研究成果: Article › 査読

Open Access

32 被引用数 (Scopus)

Identification of two types of synaptic activity in the earthworm nervous system during locomotion

Mizutani, K., Shimoi, T., Kitamura, Y., Ogawa, H. & Oka, K., 2003 10月 6, In: Neuroscience. 121, 2, p. 473-478 6 p.

研究成果: Article › 査読

13 被引用数 (Scopus)

In vitro protein microarrays for detecting protein-protein interactions: Application of a new method for fluorescence labeling of proteins

Kawahashi, Y., Doi, N., Takashima, H., Tsuda, C., Oishi, Y., Oyama, R., Yonezawa, M., Miyamoto-Sato, E. & Yanagawa, H., 2003 7月 1, In: Proteomics. 3, 7, p. 1236-1243 8 p.

研究成果: Article › 査読

71 被引用数 (Scopus)

Kinetic simulation of signal transduction system in hippocampal long-term potentiation with dynamic modeling of protein phosphatase 2A

Kikuchi, S., Fujimoto, K., Kitagawa, N., Fuchikawa, T., Abe, M., Oka, K., Takei, K. & Tomita, M., 2003 11月, In: Neural Networks. 16, 9, p. 1389-1398 10 p.

研究成果: Article › 査読

21 被引用数 (Scopus)

Na⁺/Mg²⁺ transporter acts as a Mg²⁺ buffering mechanism in PC12 cells

Kubota, T., Tokuno, K., Nakagawa, J., Kitamura, Y., Ogawa, H., Suzuki, Y., Suzuki, K. & Oka, K., 2003 3月 28, In: Biochemical and Biophysical Research Communications. 303, 1, p. 332-336 5 p.

研究成果: Article › 査読

26 被引用数 (Scopus)

Overexpression of cyclin D1 contributes to malignancy by up-regulation of fibroblast growth factor receptor 1 via the pRB/E2F pathway

Tashiro, E., Maruki, H., Minato, Y., Doki, Y., Weinstein, I. B. & Imoto, M., 2003 1月 15, In: Cancer Research. 63, 2, p. 424-431 8 p.

研究成果: Article › 査読

47 被引用数 (Scopus)

Pair hidden Markov models on tree structures

Sakakibara, Y., 2003, In: Bioinformatics. 19, SUPPL. 1, p. i232-i240

研究成果: Article › 査読

Open Access

45 被引用数 (Scopus)

Real-time measurement of nitric oxide using a bio-imaging and an electrochemical technique

Kitamura, Y., Ogawa, H. & Oka, K., 2003 12月 4, In: Talanta. 61, 5, p. 717-724 8 p.

研究成果: Article › 査読

2 被引用数 (Scopus)

Reassessment of parameters for applying motor-unit triggered stimuli in peri-stimulus time histograms

Ushiba, J., Kagamihara, Y. & Masakado, Y., 2003 11月 14, In: Brain Research. 990, 1-2, p. 8-19 12 p.

研究成果: Article › 査読

4 被引用数 (Scopus)

Selection of novel structural zinc sites from a random peptide library

Matsubara, T., Hiura, Y., Kawahito, O., Yasuzawa, M. & Kawashiro, K., 2003 12月 4, In: FEBS Letters. 555, 2, p. 317-321 5 p.

研究成果: Article › 査読

23 被引用数 (Scopus)

Switch from asexual to sexual reproduction in the planarian Dugesia ryukyuensis

Hoshi, M., Kobayashi, K., Arioka, S., Hase, S. & Matsumoto, M., 2003 4月, In: Integrative and Comparative Biology. 43, 2, p. 242-246 5 p.

研究成果: Article › 査読

Open Access

25 被引用数 (Scopus)

Transcriptional pattern of a novel gene, expressed specifically after the point-of-no-return during sexualization, in planaria

Hase, S., Kobayashi, K., Koyanagi, R., Hoshi, M. & Matsumoto, M., 2003 1月 1, In: Development Genes and Evolution. 212, 12, p. 585-592 8 p.

研究成果: Article › 査読

25 被引用数 (Scopus)

2002

A cumulative sum test for a peri-stimulus time histogram using the Monte Carlo method

Ushiba, J., Tomita, Y., Masakado, Y. & Komune, Y., 2002 8月 30, In: Journal of Neuroscience Methods. 118, 2, p. 207-214 8 p.

研究成果: Article › 査読

15 被引用数 (Scopus)

Characterization of the sperm receptor for acrosome reaction-inducing substance of the starfish, Asterias amurensis

Kawamura, M., Matsumoto, M. & Hoshi, M., 2002, In: Zoological Science. 19, 4, p. 435-442 8 p.

研究成果: Article › 査読

11 被引用数 (Scopus)

Design and synthesis of Mg²⁺-selective fluoroionophores based on a coumarin derivative and application for Mg²⁺ measurement in a living cell

Suzuki, Y., Komatsu, H., Ikeda, T., Saito, N., Araki, S., Citterio, D., Hisamoto, H., Kitamura, Y., Kubota, T., Nakagawa, J., Oka, K. & Suzuki, K., 2002 3月 15, In: Analytical Chemistry. 74, 6, p. 1423-1428 6 p.

研究成果: Article › 査読

132 被引用数 (Scopus)

Direction of action potential propagation influences calcium increases in distal dendrites of the cricket giant interneurons

Ogawa, H., Baba, Y. & Oka, K., 2002 10月 1, In: Journal of Neurobiology. 53, 1, p. 44-56 13 p.

研究成果: Article › 査読

6 被引用数 (Scopus)

Evolutionary design of generic green fluorescent protein biosensors.

Doi, N. & Yanagawa, H., 2002, In: Methods in molecular biology (Clifton, N.J.). 183, p. 49-55 7 p.

研究成果: Article › 査読

10 被引用数 (Scopus)

Fictive locomotion induced by octopamine in the earthworm

Mizutani, K., Ogawa, H., Saito, J. & Oka, K., 2002 8月 19, In: Journal of Experimental Biology. 205, 2, p. 265-271 7 p.

研究成果: Article › 査読

22 被引用数 (Scopus)

Microscopic velocimetry with a scaled-up model for evaluating a flow field over cultured endothelial cells

Fukushima, S., Deguchi, T., Kaibara, M., Oka, K. & Tanishita, K., 2002 4月 29, In: Journal of Biomechanical Engineering. 124, 2, p. 176-179 4 p.

研究成果: Article › 査読

2 被引用数 (Scopus)

Novel fluorescence labeling and high-throughput assay technologies for in vitro analysis of protein interactions

Doi, N., Takashima, H., Kinjo, M., Sakata, K., Kawahashi, Y., Oishi, Y., Oyama, R., Miyamoto-Sato, E., Sawasaki, T., Endo, Y. & Yanagawa, H., 2002, In: Genome Research. 12, 3, p. 487-492 6 p.

研究成果: Article › 査読

70 被引用数 (Scopus)

Overexpression of cyclin DI contributes to malignant properties of esophageal tumor cells by increasing VEGF production and decreasing Fas expression

Shintani, M., Okazaki, A., Masuda, T., Kawada, M., Ishizuka, M., Doki, Y., Weinstein, I. B. & Imoto, M., 2002 5月 16, In: Anticancer research. 22, 2 A, p. 639-647 9 p.

研究成果: Article › 査読

32 被引用数 (Scopus)

Receptor-independent augmentation of adenovirus-mediated gene transfer with chitosan in vitro

Kawamata, Y., Nagayama, Y., Nakao, K., Mizuguchi, H., Hayakawa, T., Sato, T. & Ishii, N., 2002 12月 1, In: Biomaterials. 23, 23, p. 4573-4579 7 p.

研究成果: Article › 査読

35 被引用数 (Scopus)

Sperm-egg binding mediated by sperm α-L-fucosidase in the ascidian, Halocynthia roretzi

Matsumoto, M., Hirata, J., Hirohashi, N. & Hoshi, M., 2002, In: Zoological Science. 19, 1, p. 43-48 6 p.

研究成果: Article › 査読

33 被引用数 (Scopus)

Spike-triggered dendritic calcium transients depend on synaptic activity in the cricket giant interneurons

Baba, Y., Ogawa, H. & Oka, K., 2002 2月 15, In: Journal of Neurobiology. 50, 3, p. 234-244 11 p.

研究成果: Article › 査読

7 被引用数 (Scopus)

Statistical test for peri-stimulus time histograms in assessing motor neuron activity

Ushiba, J., Tomita, Y., Masakado, Y., Komune, Y. & Muraoka, Y., 2002 7月, In: Medical and Biological Engineering and Computing. 40, 4, p. 462-468 7 p.

研究成果: Article › 査読

4 被引用数 (Scopus)

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