生命情報学科

研究成果

年別の研究成果 1985 2005 2006 2007 2008 2010 2011 2012 2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023

• 791 Article
• 58 Conference contribution
• 35 Review article
• 16 Chapter
• 45 その他
  • 12 Paper
  • 12 Comment/debate
  • 12 Editorial
  • 3 Conference article
  • 3 Letter
  • 3 Short survey

年別の研究成果

年別の研究成果

検索結果

• A web server for designing molecular switches composed of two interacting rnas

  Taneda, A. & Sato, K., 2021 3月 1, In: International journal of molecular sciences. 22, 5, p. 1-12 12 p., 2720.

  研究成果: Article › 査読

  Open Access

  • Secondary Structure 100%
  • switches 92%
  • RNA 91%
  • Servers 81%
  • Switches 81%

• A web-based interactive developmental table for the Ascidian Ciona intestinalis, including 3D real-image embryo reconstructions: I. From fertilized egg to hatching larva

  Hotta, K., Mitsuhara, K., Takahashi, H., Inaba, K., Oka, K., Gojobori, T. & Ikeo, K., 2007 7月, In: Developmental Dynamics. 236, 7, p. 1790-1805 16 p.

  研究成果: Article › 査読

  • Ciona intestinalis 100%
  • Urochordata 89%
  • Zygote 78%
  • Computer-Assisted Image Processing 76%
  • Larva 66%
  185 被引用数 (Scopus)

• Avian Influenza Virus Detection by Optimized Peptide Termination on a Boron-Doped Diamond Electrode

  Matsubara, T., Ujie, M., Yamamoto, T., Einaga, Y., Daidoji, T., Nakaya, T. & Sato, T., 2020 2月 28, In: ACS Sensors. 5, 2, p. 431-439 9 p.

  研究成果: Article › 査読

  • influenza 100%
  • Peptides 85%
  • viruses 77%
  • Viruses 76%
  • Boron 73%
  21 被引用数 (Scopus)

• Automatic pipeline construction focused on similarity of rate law functions for an FPGA-based biochemical simulator

  Yamada, H., Ogawa, Y., Ooya, T., Ishimori, T., Osana, Y., Yoshimi, M., Nishikawa, Y., Funahashi, A., Hiroi, N., Amano, H., Shibata, Y. & Oguri, K., 2010, In: IPSJ Transactions on System LSI Design Methodology. 3, p. 244-256 13 p.

  研究成果: Article › 査読

  • Field programmable gate arrays (FPGA) 100%
  • Pipelines 93%
  • Simulators 89%
  • Computer hardware 71%
  • Costs 9%
  2 被引用数 (Scopus)

• Automatic Detection and Measurement of Renal Cysts in Ultrasound Images: A Deep Learning Approach

  Kanauchi, Y., Hashimoto, M., Toda, N., Okamoto, S., Haque, H., Jinzaki, M. & Sakakibara, Y., 2023 2月, In: Healthcare (Switzerland). 11, 4, 484.

  研究成果: Article › 査読

  Open Access

  • Deep Learning 100%
  • Cysts 63%
  • Radiologists 40%
  • Kidney 39%
  • Ultrasonography 33%

• Automated tracking of mitotic spindle pole positions shows that LGN is required for spindle rotation but not orientation maintenance

  Corrigan, A. M., Shrestha, R. L., Zulkipli, I., Hiroi, N., Liu, Y., Tamura, N., Yang, B., Patel, J., Funahashi, A., Donald, A. & Draviam, V. M., 2013 8月 15, In: Cell Cycle. 12, 16, p. 2643-2655 13 p.

  研究成果: Article › 査読

  • Spindle Poles 100%
  • Spindle Apparatus 85%
  • Maintenance 48%
  • Dyneins 45%
  • Microtubules 33%
  18 被引用数 (Scopus)

• A Transient Rise in Free Mg²⁺ Ions Released from ATP-Mg Hydrolysis Contributes to Mitotic Chromosome Condensation

  Maeshima, K., Matsuda, T., Shindo, Y., Imamura, H., Tamura, S., Imai, R., Kawakami, S., Nagashima, R., Soga, T., Noji, H., Oka, K. & Nagai, T., 2018 2月 5, In: Current Biology. 28, 3, p. 444-451.e6

  研究成果: Article › 査読

  Open Access

  • adenosine triphosphate 100%
  • Adenosine 84%
  • Hydrolysis 81%
  • Ions 73%
  • Chromosomes 69%
  79 被引用数 (Scopus)

• Asymmetric hydrolysis of l-Cyanoalkyl acetates

  Ohta, H., Hiraga, S., Miyamoto, K. & Tsuchihashi, G. I., 1988 12月, In: Agricultural and biological chemistry. 52, 12, p. 3023-3027 5 p.

  研究成果: Article › 査読

  • Acetates 100%
  • Hydrolysis 93%
  • acetates 78%
  • hydrolysis 74%
  • Acetate 70%
  20 被引用数 (Scopus)

• Asymmetric Hydrolysis of 1-Cyanoalkyl Acetates

  Ohta, H., Hiraga, S., Miyamoto, K. & Tsuchihashi, G. I., 1988, In: Agricultural and biological chemistry. 52, 12, p. 3023-3027 5 p.

  研究成果: Article › 査読

  • Acetates 100%
  • Hydrolysis 93%
  • acetates 78%
  • hydrolysis 74%
  • Acetate 70%

• Asymmetric decarboxylation of α-hydroxy- and α-amino-α-phenylmalonate catalyzed by arylmalonate decarboxylase from Alcaligenes bronchisepticus

  Tamura, K., Terao, Y., Miyamoto, K. & Ohta, H., 2008 7月, In: Biocatalysis and Biotransformation. 26, 4, p. 253-257 5 p.

  研究成果: Article › 査読

  • malonate decarboxylase 100%
  • Decarboxylation 79%
  • Alcaligenes 73%
  • Enzymes 52%
  • Substrates 16%
  10 被引用数 (Scopus)

• Asymmetric decarboxylation of disubstituted malonic acid by alcaligenes bronchisepticus KU 1201

  Miyamoto, K. & Ohta, H., 1991, In: Biocatalysis and Biotransformation. 5, 1, p. 49-60 12 p.

  研究成果: Article › 査読

  • Decarboxylation 100%
  • Alcaligenes 93%
  • malonic acid 90%
  • Malonic Acid 70%
  • Acids 52%
  41 被引用数 (Scopus)

• Asterosap-induced elevation in intracellular pH is indispensable for ARIS-induced sustained increase in intracellular Ca²⁺ and following acrosome reaction in starfish spermatozoa

  Kawase, O., Minakata, H., Hoshi, M. & Matsumoto, M., 2005 2月, In: Zygote. 13, 1, p. 63-71 9 p.

  研究成果: Article › 査読

  • Starfish 100%
  • Acrosome Reaction 91%
  • Spermatozoa 60%
  • Seawater 12%
  • 1-(2-(3-(4-methoxyphenyl)propoxy)-4-methoxyphenylethyl)-1H-imidazole 10%
  10 被引用数 (Scopus)

• Assessing uncertainty in model parameters based on sparse and noisy experimental data

  Hiroi, N., Swat, M. & Funahashi, A., 2014, In: Frontiers in Physiology. 5 APR, Article 128.

  研究成果: Article › 査読

  • Uncertainty 100%
  • Intercellular Signaling Peptides and Proteins 58%
  • Theoretical Models 58%
  • Transcription Factors 54%
  • Least-Squares Analysis 40%
  1 被引用数 (Scopus)

• A sperm-activating peptide controls a cGMP-signaling pathway in starfish sperm

  Matsumoto, M., Solzin, J., Helbig, A., Hagen, V., Ueno, S. I., Kawase, O., Maruyama, Y., Ogiso, M., Godde, M., Minakata, H., Kaupp, U. B., Hoshi, M. & Weyand, I., 2003 8月 15, In: Developmental Biology. 260, 2, p. 314-324 11 p.

  研究成果: Article › 査読

  • Starfish 100%
  • Spermatozoa 60%
  • Peptides 41%
  • Invertebrates 29%
  • resact 29%
  82 被引用数 (Scopus)

• A single motor neuron determines the rhythm of early motor behavior in Ciona

  Akahoshi, T., Utsumi, M. K., Oonuma, K., Murakami, M., Horie, T., Kusakabe, T. G., Oka, K. & Hotta, K., 2021 12月, In: Science Advances. 7, 50, eabl6053.

  研究成果: Article › 査読

  • Ciona 100%
  • Motor Neurons 57%
  • Chordata 43%
  • Urochordata 42%
  • Optogenetics 38%
  2 被引用数 (Scopus)

• A simple two-transition model for loss of infectivity of phages on exposure to organic solvent

  Matsubara, T., Emoto, W. & Kawashiro, K., 2007 6月 1, In: Biomolecular Engineering. 24, 2, p. 269-271 3 p.

  研究成果: Article › 査読

  • Bacteriophages 100%
  • Organic solvents 89%
  • Organic Solvent 46%
  • Peptide Library 43%
  • Peptides 41%
  7 被引用数 (Scopus)

• A self-marker-like protein governs hemocyte allorecognition in Halocynthia roretzi

  Ema, M., Okada, T., Takahashi, M., Uchiyama, M., Kubo, H., Moriyama, H., Miyakawa, H. & Matsumoto, M., 2019 12月 16, In: Zoological Letters. 5, 1, 34.

  研究成果: Article › 査読

  Open Access

  • Halocynthia roretzi 100%
  • hemocytes 68%
  • monophenol monooxygenase 44%
  • proteins 21%
  • Ascidiacea 21%
  2 被引用数 (Scopus)

• Arylmalonate Decarboxylase-Catalyzed Asymmetric Synthesis of Both Enantiomers of Optically Pure Flurbiprofen

  Gaßmeyer, S. K., Wetzig, J., Mügge, C., Assmann, M., Enoki, J., Hilterhaus, L., Zuhse, R., Miyamoto, K., Liese, A. & Kourist, R., 2016 3月 7, In: ChemCatChem. 8, 5, p. 916-921 6 p.

  研究成果: Article › 査読

  • Enantiomers 100%
  • Flurbiprofen 82%
  • enantiomers 78%
  • Enantiomer 44%
  • synthesis 41%
  21 被引用数 (Scopus)

• Artificial Cell Fermentation as a Platform for Highly Efficient Cascade Conversion

  Fujiwara, K., Adachi, T. & Doi, N., 2018 2月 16, In: ACS Synthetic Biology. 7, 2, p. 363-370 8 p.

  研究成果: Article › 査読

  • Artificial Cells 100%
  • Enzymes 82%
  • Fermentation 79%
  • Stereoselectivity 49%
  • Liposomes 39%
  14 被引用数 (Scopus)

• A relationship between ntp and cell extract concentration for cell-free protein expression

  Takahashi, K., Sato, G., Doi, N. & Fujiwara, K., 2021 3月, In: Life. 11, 3, 237.

  研究成果: Article › 査読

  Open Access

  • cell-free protein synthesis 100%
  • Cell Extracts 79%
  • Protein Synthesis 76%
  • protein synthesis 71%
  • proteins 58%
  4 被引用数 (Scopus)

• A proteomic study of mitotic phase-Specific interactors of EB1 reveals a role for SXIP-Mediated protein interactions in anaphase onset

  Tamura, N., Simon, J. E., Nayak, A., Shenoy, R., Hiroi, N., Boilot, V., Funahashi, A. & Draviam, V. M., 2015 2月 15, In: Biology Open. 4, 2, p. 155-169 15 p.

  研究成果: Article › 査読

  Open Access

  • Anaphase 100%
  • anaphase 89%
  • Mitosis 76%
  • Microtubules 75%
  • microtubules 73%
  22 被引用数 (Scopus)

• Application of quantitative real-time PCR for monitoring the process of enrichment of clones on in vitro protein selection

  Horisawa, K., Doi, N., Takashima, H. & Yanagawa, H., 2005 2月, In: Journal of biochemistry. 137, 2, p. 121-124 4 p.

  研究成果: Article › 査読

  • Clone Cells 100%
  • Real-Time Polymerase Chain Reaction 99%
  • Complementary DNA 65%
  • Viruses 55%
  • In Vitro Techniques 55%
  6 被引用数 (Scopus)

• Apparent suppression of MMP-9 activity by GD1a as determined by gelatin zymography

  Hu, D., Tan, X., Sato, T., Yamagata, S. & Yamagata, T., 2006 10月 13, In: Biochemical and Biophysical Research Communications. 349, 1, p. 426-431 6 p.

  研究成果: Article › 査読

  • Ganglioside 100%
  • Gelatin 85%
  • Matrix Metalloproteinase 9 85%
  • Conditioned Culture Medium 59%
  • Electrophoresis 35%
  7 被引用数 (Scopus)

• Apoptosis-inducing activity and antiproliferative effect of Paeoniflorigenone from moutan cortex

  Huang, Y., Ohno, O., Suenaga, K. & Miyamoto, K., 2017, In: Bioscience, Biotechnology and Biochemistry. 81, 6, p. 1106-1113 8 p.

  研究成果: Article › 査読

  • paeoniflorigenone 100%
  • Paeoniflorigenone 93%
  • moutan cortex 75%
  • Z-VAD-FMK 45%
  • Antiproliferative 43%
  8 被引用数 (Scopus)

• A pilot study of contralateral homonymous muscle activity simulated electrical stimulation in chronic hemiplegia

  Osu, R., Otaka, Y., Ushiba, J., Sakata, S., Yamaguchi, T., Fujiwara, T., Kondo, K. & Liu, M., 2012 8月, In: Brain Injury. 26, 9, p. 1105-1112 8 p.

  研究成果: Article › 査読

  • Hemiplegia 100%
  • Electric Stimulation 74%
  • motor function 57%
  • Muscles 49%
  • stroke 47%
  7 被引用数 (Scopus)

• A peptide motif recognizing a polymer stereoregularity

  Serizawa, T., Sawada, T., Matsuno, H., Matsubara, T. & Sato, T., 2005 10月 12, In: Journal of the American Chemical Society. 127, 40, p. 13780-13781 2 p.

  研究成果: Article › 査読

  • Bacteriophages 100%
  • Peptides 83%
  • Polymers 56%
  • Polymethyl methacrylates 55%
  • Polymethyl Methacrylate 53%
  81 被引用数 (Scopus)

• Antitumor effect of piericidin B₁ N-oxide

  Nishioka, H., Sawa, T., Takeuchi, T., Imoto, M., Imaoka, T. & Umezawa, K., 1994 1月 1, In: The Journal of Antibiotics. 47, 4, p. 447-452 6 p.

  研究成果: Article › 査読

  Open Access

  • piericidin B1 N-oxide 100%
  • Antitumor 35%
  • Phosphatidylinositol 31%
  • Phosphatidylinositols 27%
  • Phosphatidic Acids 8%
  19 被引用数 (Scopus)

• Antiproliferative and apoptosis induction of α-mangostin in T47D breast cancer cells

  Kritsanawong, S., Innajak, S., Imoto, M. & Watanapokasin, R., 2016 5月, In: International journal of oncology. 48, 5, p. 2155-2165 11 p.

  研究成果: Article › 査読

  • mangostin 100%
  • human ERBB2 protein 43%
  • Garcinia mangostana 39%
  • Breast Neoplasms 37%
  • Apoptosis 35%
  50 被引用数 (Scopus)

• Anticipatory postural adjustments contribute to age-related changes in compensatory steps associated with unilateral perturbations

  Hyodo, M., Saito, M., Ushiba, J., Tomita, Y., Minami, M. & Masakado, Y., 2012 7月 1, In: Gait and Posture. 36, 3, p. 625-630 6 p.

  研究成果: Article › 査読

  • Elderly 100%
  • Accidental Falls 67%
  • Foot 17%
  14 被引用数 (Scopus)

• Antarlides F-H, new members of the antarlide family produced by Streptomyces sp. BB47

  Saito, S., Fujimaki, T., Panbangred, W., Sawa, R., Igarashi, Y. & Imoto, M., 2017 5月 1, In: Journal of Antibiotics. 70, 5, p. 595-600 6 p.

  研究成果: Article › 査読

  • Androgen 100%
  • Streptomyces 97%
  • Androgen Receptor Antagonists 96%
  • MDV 3100 93%
  • Androgen Receptor Antagonist 90%
  4 被引用数 (Scopus)

• Antarlides: A New Type of Androgen Receptor (AR) Antagonist that Overcomes Resistance to AR-Targeted Therapy

  Saito, S., Fujimaki, T., Panbangred, W., Igarashi, Y. & Imoto, M., 2016 2月 18, In: Angewandte Chemie - International Edition. 55, 8, p. 2728-2732 5 p.

  研究成果: Article › 査読

  • Androgens 100%
  • Androgen Receptor Antagonist 88%
  • Androgen 65%
  • Resistance 32%
  • Methanolysis 12%
  10 被引用数 (Scopus)

• A novel thermostable esterase from the thermoacidophilic archaeon Sulfolobus tokodaii strain 7

  Suzuki, Y., Miyamoto, K. & Ohta, H., 2004 7月 1, In: FEMS microbiology letters. 236, 1, p. 97-102 6 p.

  研究成果: Article › 査読

  • Sulfolobus 100%
  • Archaea 73%
  • Esterases 72%
  • Esters 61%
  • 4-nitrophenyl butyrate 56%
  47 被引用数 (Scopus)

• A novel cyclic lipoundecapeptide, pholipeptin, isolated from Pseudomonas sp.

  Ui, H., Miyake, T., Iinuma, H., Imoto, M., Hattori, S., Hamada, M., Takeuchi, T., Umezawa, S. & Umezawa, K., 1995 10月 9, In: Tetrahedron Letters. 36, 41, p. 7479-7480 2 p.

  研究成果: Article › 査読

  • myrmicacin 100%
  • 3-Hydroxydecanoic Acid 88%
  • Trifluoroacetic Acid 74%
  • Phosphoinositide Phospholipase C 65%
  • Pseudomonas 51%
  7 被引用数 (Scopus)

• A novel biological role of tachykinins as an up-regulator of oocyte growth: Identification of an evolutionary origin of tachykininergic functions in the ovary of the ascidian, Ciona intestinalis

  Aoyama, M., Kawada, T., Fujie, M., Hotta, K., Sakai, T., Sekiguchi, T., Oka, K., Satoh, N. & Satake, H., 2008 9月, In: Endocrinology. 149, 9, p. 4346-4356 11 p.

  研究成果: Article › 査読

  • Ciona intestinalis 100%
  • Urochordata 89%
  • Tachykinins 85%
  • Oocytes 58%
  • Ovary 55%
  44 被引用数 (Scopus)

• A non-parametric bayesian approach for predicting rna secondary structures

  Sato, K., Hamada, M., Mituyama, T., Asai, K. & Sakakibara, Y., 2010 8月, In: Journal of Bioinformatics and Computational Biology. 8, 4, p. 727-742 16 p.

  研究成果: Article › 査読

  • Bayes Theorem 100%
  • RNA 98%
  • Secondary Structure 72%
  • Stochastic Processes 62%
  • Context free grammars 54%
  8 被引用数 (Scopus)

• Anomalous exciton spectra of laser-driven semiconductor superlattices

  Yashima, K., Oka, K., Hino, K. I., Maeshima, N. & Tong, X. M., 2009 6月, In: Solid State Communications. 149, 21-22, p. 823-826 4 p.

  研究成果: Article › 査読

  • Semiconductor superlattices 100%
  • Semiconductor Superlattices 91%
  • Excitons 78%
  • Interband Transition 71%
  • Tunneling 45%
  3 被引用数 (Scopus)

• An improved de novo genome assembly of the common marmoset genome yields improved contiguity and increased mapping rates of sequence data

  Jayakumar, V., Ishii, H., Seki, M., Kumita, W., Inoue, T., Hase, S., Sato, K., Okano, H., Sasaki, E. & Sakakibara, Y., 2020 4月 2, In: BMC Genomics. 21, 243.

  研究成果: Article › 査読

  Open Access

  • Callithrix 100%
  • Genome 50%
  • Genomics 13%
  • Primates 12%
  • Research Personnel 4%
  7 被引用数 (Scopus)

• An extended genovo metagenomic assembler by incorporating paired-end information

  Afiahayati, Sato, K. & Sakakibara, Y., 2013, In: PeerJ. 2013, 1, e196.

  研究成果: Article › 査読

  • Metagenomics 100%
  • Metagenome 86%
  • Sampling 66%
  • Datasets 47%
  • Genome 41%
  12 被引用数 (Scopus)

• An explainable deep learning-based algorithm with an attention mechanism for predicting the live birth potential of mouse embryos

  Tokuoka, Y., Yamada, T. G., Mashiko, D., Ikeda, Z., Kobayashi, T. J., Yamagata, K. & Funahashi, A., 2022 12月, In: Artificial Intelligence in Medicine. 134, 102432.

  研究成果: Article › 査読

  Open Access

  • Deep Learning 100%
  • Live Birth 75%
  • Deep learning 64%
  • Embryonic Structures 59%
  • Cells 47%

• A new therapeutic application of brain-machine interface (BMI) training followed by hybrid assistive neuromuscular dynamic stimulation (HANDS) therapy for patients with severe hemiparetic stroke: A proof of concept study

  Kawakami, M., Fujiwara, T., Ushiba, J., Nishimoto, A., Abe, K., Honaga, K., Nishimura, A., Mizuno, K., Kodama, M., Masakado, Y. & Liu, M., 2016, In: Restorative Neurology and Neuroscience. 34, 5, p. 789-797 9 p.

  研究成果: Article › 査読

  • Brain-Computer Interfaces 100%
  • Proof of Concept Study 92%
  • Stroke 50%
  • Fingers 43%
  • Paresis 21%
  30 被引用数 (Scopus)

• A near-infrared fluorescent calcium probe: A new tool for intracellular multicolour Ca²⁺ imaging

  Matsui, A., Umezawa, K., Shindo, Y., Fujii, T., Citterio, D., Oka, K. & Suzuki, K., 2011 10月 7, In: Chemical Communications. 47, 37, p. 10407-10409 3 p.

  研究成果: Article › 査読

  • Fluo-4 100%
  • Fluorophores 93%
  • Optical properties 69%
  • Fluorescence 63%
  • Calcium 60%
  78 被引用数 (Scopus)

• An Artificial Reaction Promoter Modulates Mitochondrial Functions via Chemically Promoting Protein Acetylation

  Shindo, Y., Komatsu, H., Hotta, K., Ariga, K. & Oka, K., 2016 7月 4, In: Scientific reports. 6, 29224.

  研究成果: Article › 査読

  Open Access

  • Acetyl Coenzyme A 100%
  • Acetylation 79%
  • Mitochondria 62%
  • Adenosine Triphosphate 58%
  • Mitochondrial Proteins 43%
  5 被引用数 (Scopus)

• Analysis and synthesis of feature map for kernel-based quantum classifier

  Suzuki, Y., Yano, H., Gao, Q., Uno, S., Tanaka, T., Akiyama, M. & Yamamoto, N., 2020 6月 1, In: Quantum Machine Intelligence. 2, 1

  研究成果: Article › 査読

  • Classifier 100%
  • Synthesis 80%
  • Classifiers 62%
  • kernel 60%
  • Qubits 41%
  10 被引用数 (Scopus)

• An algorithm for testing structure freeness of biomolecular sequences

  Kobayashi, S., Yokomori, T. & Sakakibara, Y., 2004 12月 1, In: Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 2950, p. 266-277 12 p.

  研究成果: Article › 査読

  • Efficient Algorithms 100%
  • Secondary Structure 83%
  • Testing 82%
  • DNA sequences 71%
  • Open Problems 46%
  7 被引用数 (Scopus)

• An accessibility-incorporated method for accurate prediction of RNA-RNA interactions from sequence data

  Kato, Y., Mori, T., Sato, K., Maegawa, S., Hosokawa, H. & Akutsu, T., 2017 1月 15, In: Bioinformatics. 33, 2, p. 202-209 8 p.

  研究成果: Article › 査読

  • Accessibility 100%
  • RNA 95%
  • Prediction 63%
  • Interaction 57%
  • Prediction Model 33%
  5 被引用数 (Scopus)

• Amyloid- fibrils assembled on ganglioside-enriched membranes contain both parallel -sheets and turns

  Matsubara, T., Yasumori, H., Ito, K., Shimoaka, T., Hasegawa, T. & Sato, T., 2018 9月 7, In: Journal of Biological Chemistry. 293, 36, p. 14146-14154 9 p.

  研究成果: Article › 査読

  Open Access

  • Gangliosides 100%
  • Amyloid Fibril 96%
  • Amyloid 76%
  • Membranes 48%
  • Alzheimer Disease 31%
  26 被引用数 (Scopus)

• AMPA glutamate receptors are required for sensory-organ formation and morphogenesis in the basal chordate

  Hirai, S., Hotta, K., Kubo, Y., Nishino, A., Okabe, S., Okamura, Y. & Okado, H., 2017 4月 11, In: Proceedings of the National Academy of Sciences of the United States of America. 114, 15, p. 3939-3944 6 p.

  研究成果: Article › 査読

  Open Access

  • Chordata 100%
  • Urochordata 96%
  • AMPA Receptors 81%
  • Glutamate Receptors 75%
  • Morphogenesis 68%
  10 被引用数 (Scopus)

• A method for selective ablation of neurons in C. elegans using the phototoxic fluorescent protein, KillerRed

  Kobayashi, J., Shidara, H., Morisawa, Y., Kawakami, M., Tanahashi, Y., Hotta, K. & Oka, K., 2013 8月 26, In: Neuroscience Letters. 548, p. 261-264 4 p.

  研究成果: Article › 査読

  • Sensory Receptor Cells 100%
  • Neurons 86%
  • benzaldehyde 74%
  • Diacetyl 72%
  • Methyl Green 68%
  34 被引用数 (Scopus)

• A max-margin training of RNA secondary structure prediction integrated with the thermodynamic model

  Akiyama, M., Sato, K. & Sakakibara, Y., 2018 12月 1, In: Journal of Bioinformatics and Computational Biology. 16, 6, 18400255.

  研究成果: Article › 査読

  • Thermodynamics 100%
  • RNA 98%
  • Machine Learning 92%
  • Secondary Structure 72%
  • Machine learning 47%
  14 被引用数 (Scopus)

• A max-margin model for predicting residue—base contacts in protein–rna interactions

  Kashiwagi, S., Sato, K. & Sakakibara, Y., 2021 11月, In: Life. 11, 11, 1135.

  研究成果: Article › 査読

  Open Access

  • margins 100%
  • proteins 58%
  • scoring 48%
  • RNA 47%
  • RNA Sequence 41%