• 2625 引用
  • 17 h指数
19962020

年単位の研究成果

Pureに変更を加えた場合、すぐここに表示されます。

研究成果

2006

An FPGA implementation of high throughput stochastic simulator for large-scale biochemical systems

Yoshimi, M., Osana, Y., Iwaoka, Y., Nishikawa, Y., Kojima, T., Shibata, Y., Iwanaga, N., Funahashi, A., Hiroi, N., Kitano, H. & Amano, H., 2006 12 1, Proceedings - 2006 International Conference on Field Programmable Logic and Applications, FPL. p. 227-232 6 p. 4100980. (Proceedings - 2006 International Conference on Field Programmable Logic and Applications, FPL).

研究成果: Conference contribution

6 引用 (Scopus)

Celldesigner: A modeling tool for biochemical networks

Funahashi, A., Matsuoka, Y., Jouraku, A., Kitano, H. & Kikuchi, N., 2006 12 1, Proceedings of the 2006 Winter Simulation Conference, WSC. p. 1707-1712 6 p. 4117804. (Proceedings - Winter Simulation Conference).

研究成果: Conference contribution

20 引用 (Scopus)
16 引用 (Scopus)

Performance evaluation of an FPGA-based biochemical simulator ReCSiP

Osana, Y., Yoshimi, M., Iwaoka, Y., Kojima, T., Nishikawa, Y., Funahashi, A., Hiroi, N., Kitano, H., Amano, H., Shibata, Y. & Iwanaga, N., 2006 12 1, Proceedings - 2006 International Conference on Field Programmable Logic and Applications, FPL. p. 845-850 6 p. 4101089. (Proceedings - 2006 International Conference on Field Programmable Logic and Applications, FPL).

研究成果: Conference contribution

4 引用 (Scopus)
2005

A comprehensive pathway map of epidermal growth factor receptor signaling.

Oda, K., Matsuoka, Y., Funahashi, A. & Kitano, H., 2005, : : Molecular systems biology. 1, p. 2005.0010

研究成果: Article

696 引用 (Scopus)

A framework for ODE-based multimodel biochemical simulations on an FPGA

Osana, Y., Fukushima, T., Yoshimi, M., Iwaoka, Y., Funahashi, A., Hiroi, N., Shibata, Y., Iwanaga, N., Kitano, H. & Amano, H., 2005 12 1, Proceedings - 2005 International Conference on Field Programmable Logic and Applications, FPL. p. 574-577 4 p. 1515788. (Proceedings - 2005 International Conference on Field Programmable Logic and Applications, FPL; 巻数 2005).

研究成果: Conference contribution

3 引用 (Scopus)

An FPGA-based, multi-model simulation method for biochemical systems

Osana, Y., Fukushima, T., Yoshimi, M., Iwaoka, Y., Funahashi, A., Hiroi, N., Shibata, Y., Kitano, H. & Amano, H., 2005 12 1, Proceedings - 19th IEEE International Parallel and Distributed Processing Symposium, IPDPS 2005. 1420035. (Proceedings - 19th IEEE International Parallel and Distributed Processing Symposium, IPDPS 2005; 巻数 2005).

研究成果: Conference contribution

4 引用 (Scopus)

Efficient scheduling of rate law functions for ODE-based multimodel biochemical simulation on an FPGA

Iwanagra, N., Shibata, Y., Yoshimi, M., Osana, Y., Iwaoka, Y., Fukushima, T., Amano, H., Funahashi, A., Hiroi, N., Kitano, H. & Oguri, K., 2005 12 1, Proceedings - 2005 International Conference on Field Programmable Logic and Applications, FPL. p. 666-669 4 p. 1515809. (Proceedings - 2005 International Conference on Field Programmable Logic and Applications, FPL; 巻数 2005).

研究成果: Conference contribution

10 引用 (Scopus)

The design of scalable stochastic biochemical simulator on FPGA

Yoshimi, M., Osana, Y., Iwaoka, Y., Funahashi, A., Hiroi, N., Shibata, Y., Iwanaga, N., Kitano, H. & Amano, H., 2005 12 1, Proceedings - 2005 IEEE International Conference on Field Programmable Technology. p. 339-340 2 p. 1568590. (Proceedings - 2005 IEEE International Conference on Field Programmable Technology; 巻数 2005).

研究成果: Conference contribution

6 引用 (Scopus)

Using process diagrams for the graphical representation of biological networks

Kitano, H., Funahashi, A., Matsuoka, Y. & Oda, K., 2005 8 1, : : Nature Biotechnology. 23, 8, p. 961-966 6 p.

研究成果: Review article

322 引用 (Scopus)
2004

Evolving a lingua franca and associated software infrastructure for computational systems biology: the Systems Biology Markup Language (SBML) project.

Hucka, M., Finney, A., Bornstein, B. J., Keating, S. M., Shapiro, B. E., Matthews, J., Kovitz, B. L., Schilstra, M. J., Funahashi, A., Doyle, J. C. & Kitano, H., 2004 6, : : Systems biology. 1, 1, p. 41-53 13 p.

研究成果: Review article

156 引用 (Scopus)
2002

Routing algorithms based on 2D turn model for irregular networks

Jouraku, A., Koibuchi, M., Amano, H. & Funahashi, A., 2002 1 1, Proceedings - International Symposium on Parallel Architectures, Algorithms and Networks, I-SPAN 2002. Hsu, D. F., Saldana, R. P. & Ibarra, O. H. (版). IEEE Computer Society, p. 289-294 6 p. 1004296. (Proceedings of the International Symposium on Parallel Architectures, Algorithms and Networks, I-SPAN; 巻数 2002-January).

研究成果: Conference contribution

13 引用 (Scopus)
2001

L-turn routing: An adaptive routing in irregular networks

Koibuchi, M., Funahashi, A., Jouraku, A. & Amano, H., 2001, Proceedings of the International Conference on Parallel Processing. Institute of Electrical and Electronics Engineers Inc., 巻 2001-January. p. 383-392 10 p. 952084

研究成果: Conference contribution

48 引用 (Scopus)
55 引用 (Scopus)
1997

Adaptive routing on the recursive diagonal torus

Funahashi, A., Hanawa, T., Kudoh, T. & Amano, H., 1997, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Springer Verlag, 巻 1336. p. 171-182 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); 巻数 1336).

研究成果: Conference contribution

1 引用 (Scopus)
1996