• 2607 引用
  • 17 h指数
19962020

年単位の研究成果

Pureに変更を加えた場合、すぐここに表示されます。

研究成果

ReCSiP: An FPGA-based general-purpose biochemical simulator

Osana, Y., Yoshimi, M., Iwaoka, Y., Kojima, T., Nishikawa, Y., Funahashi, A., Hiroi, N., Shibata, Y., Iwanaga, N., Kitano, H. & Amano, H., 2007 7 1, : : Electronics and Communications in Japan, Part II: Electronics (English translation of Denshi Tsushin Gakkai Ronbunshi). 90, 7, p. 1-10 10 p.

研究成果: Article

10 引用 (Scopus)
55 引用 (Scopus)

Requirement of spatiotemporal resolution for imaging intracellular temperature distribution

Hiroi, N., Tanimoto, R., Ii, K., Ozeki, M., Mashimo, K. & Funahashi, A., 2017, Biomedical Imaging and Sensing Conference. SPIE, 巻 10251. 102510Q

研究成果: Conference contribution

Routing algorithms based on 2D turn model for irregular networks

Jouraku, A., Koibuchi, M., Amano, H. & Funahashi, A., 2002 1 1, Proceedings - International Symposium on Parallel Architectures, Algorithms and Networks, I-SPAN 2002. Hsu, D. F., Saldana, R. P. & Ibarra, O. H. (版). IEEE Computer Society, p. 289-294 6 p. 1004296. (Proceedings of the International Symposium on Parallel Architectures, Algorithms and Networks, I-SPAN; 巻数 2002-January).

研究成果: Conference contribution

13 引用 (Scopus)

SBML models and MathSBML

Shapiro, B. E., Finney, A., Hucka, M., Bornstein, B., Funahashi, A., Jouraku, A., Keating, S. M., Le Novère, N., Matthews, J. & Schilstra, M. J., 2007 12 1, Introduction to Systems Biology. Humana Press, p. 395-421 27 p.

研究成果: Chapter

2 引用 (Scopus)

Simulation technology and its application in systems biology

Funahashi, A. & Hiroi, N., 2016, : : Folia Pharmacologica Japonica. 147, 2, p. 101-106 6 p.

研究成果: Article

Software support for SBGN maps: SBGN-ML and LibSBGN

Van Iersel, M. P., Villéger, A. C., Czauderna, T., Boyd, S. E., Bergmann, F. T., Luna, A., Demir, E., Sorokin, A., Dogrusoz, U., Matsuoka, Y., Funahashi, A., Aladjem, M. I., Mi, H., Moodie, S. L., Kitano, H., Le novère, N. & Schreiber, F., 2012 8, : : Bioinformatics. 28, 15, p. 2016-2021 6 p., bts270.

研究成果: Article

47 引用 (Scopus)

The DBCLS BioHackathon: Standardization and interoperability for bioinformatics web services and workflows

Katayama, T., Arakawa, K., Nakao, M., Ono, K., Aoki-Kinoshita, K. F., Yamamoto, Y., Yamaguchi, A., Kawashima, S., Chun, H. W., Aerts, J., Aranda, B., Barboza, L. H., Bonnal, R. J. P., Bruskiewich, R., Bryne, J. C., Fernández, J. M., Funahashi, A., Gordon, P. M. K., Goto, N., Groscurth, A. および37人, Gutteridge, A., Holland, R., Kano, Y., Kawas, E. A., Kerhornou, A., Kibukawa, E., Kinjo, A. R., Kuhn, M., Lapp, H., Lehvaslaiho, H., Nakamura, H., Nakamura, Y., Nishizawa, T., Nobata, C., Noguchi, T., Oinn, T. M., Okamoto, S., Owen, S., Pafilis, E., Pocock, M., Prins, P., Ranzinger, R., Reisinger, F., Salwinski, L., Schreiber, M., Senger, M., Shigemoto, Y., Standley, D. M., Sugawara, H., Tashiro, T., Trelles, O., Vos, R. A., Wilkinson, M. D., York, W., Zmasek, C. M., Asai, K. & Takagi, T., 2010 8 21, : : Journal of Biomedical Semantics. 1, 8.

研究成果: Review article

21 引用 (Scopus)

The design of scalable stochastic biochemical simulator on FPGA

Yoshimi, M., Osana, Y., Iwaoka, Y., Funahashi, A., Hiroi, N., Shibata, Y., Iwanaga, N., Kitano, H. & Amano, H., 2005 12 1, Proceedings - 2005 IEEE International Conference on Field Programmable Technology. p. 339-340 2 p. 1568590. (Proceedings - 2005 IEEE International Conference on Field Programmable Technology; 巻数 2005).

研究成果: Conference contribution

6 引用 (Scopus)

The principles of whole-cell modeling

Karr, J. R., Takahashi, K. & Funahashi, A., 2015 10 1, : : Current Opinion in Microbiology. 27, p. 18-24 7 p.

研究成果: Article

30 引用 (Scopus)

The Systems Biology Graphical Notation

Novère, N. L., Hucka, M., Mi, H., Moodie, S., Schreiber, F., Sorokin, A., Demir, E., Wegner, K., Aladjem, M. I., Wimalaratne, S. M., Bergman, F. T., Gauges, R., Ghazal, P., Kawaji, H., Li, L., Matsuoka, Y., Villéger, A., Boyd, S. E., Calzone, L., Courtot, M. および19人, Dogrusoz, U., Freeman, T. C., Funahashi, A., Ghosh, S., Jouraku, A., Kim, S., Kolpakov, F., Luna, A., Sahle, S., Schmidt, E., Watterson, S., Wu, G., Goryanin, I., Kell, D. B., Sander, C., Sauro, H., Snoep, J. L., Kohn, K. & Kitano, H., 2009 8, : : Nature Biotechnology. 27, 8, p. 735-741 7 p.

研究成果: Review article

522 引用 (Scopus)

The systems biology simulation core algorithm

Keller, R., Dörr, A., Tabira, A., Funahashi, A., Ziller, M. J., Adams, R., Rodriguez, N., Novère, N. L., Hiroi, N., Planatscher, H., Zell, A. & Dräger, A., 2013 7 5, : : BMC Systems Biology. 7, 55.

研究成果: Article

20 引用 (Scopus)

Transcriptome analysis of the anhydrobiotic cell line Pv11 infers the mechanism of desiccation tolerance and recovery

Yamada, T. G., Suetsugu, Y., Deviatiiarov, R., Gusev, O., Cornette, R., Nesmelov, A., Hiroi, N., Kikawada, T. & Funahashi, A., 2018 12 1, : : Scientific reports. 8, 1, 17941.

研究成果: Article

2 引用 (Scopus)

Using process diagrams for the graphical representation of biological networks

Kitano, H., Funahashi, A., Matsuoka, Y. & Oda, K., 2005 8 1, : : Nature Biotechnology. 23, 8, p. 961-966 6 p.

研究成果: Review article

321 引用 (Scopus)
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