• 2508 引用
  • 25 h指数
1987 …2020

年単位の研究成果

Pureに変更を加えた場合、すぐここに表示されます。

研究成果

フィルター
Conference contribution
2012

Poster: In silico microarray algorithm: Accurate and fast taxonomic profiling from short read sequences

Tagami, T., Hachiya, T. & Sakakibara, Y., 2012 5 8, 2012 IEEE 2nd International Conference on Computational Advances in Bio and Medical Sciences, ICCABS 2012. 6182660. (2012 IEEE 2nd International Conference on Computational Advances in Bio and Medical Sciences, ICCABS 2012).

研究成果: Conference contribution

2011

MetaVelvet: AAAn extension of Velvet assembler to de novo metagenome assembly from short sequence reads

Namiki, T., Hachiya, T., Tanaka, H. & Sakakibara, Y., 2011 12 1, 2011 ACM Conference on Bioinformatics, Computational Biology and Biomedicine, BCB 2011. p. 116-124 9 p. (2011 ACM Conference on Bioinformatics, Computational Biology and Biomedicine, BCB 2011).

研究成果: Conference contribution

13 引用 (Scopus)
2010

Development of a bacteria computer: From in silico finite automata to in vitro and in vivo

Sakakibara, Y., 2010 7 29, Programs, Proofs, Processes - 6th Conference on Computability in Europe, CiE 2010, Proceedings. p. 362-371 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); 巻数 6158 LNCS).

研究成果: Conference contribution

Improvement of structure conservation index with centroid estimators

Okada, Y., Sato, K. & Sakakibara, Y., 2010 12 1, Pacific Symposium on Biocomputing 2010, PSB 2010. p. 88-97 10 p. (Pacific Symposium on Biocomputing 2010, PSB 2010).

研究成果: Conference contribution

3 引用 (Scopus)
2009

A non-parametric bayesian approach for predicting RNA secondary structures

Sato, K., Hamada, M., Mituyama, T., Asai, K. & Sakakibara, Y., 2009 11 2, Algorithms in Bioinformatics - 9th International Workshop, WABI 2009, Proceedings. p. 286-297 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); 巻数 5724 LNBI).

研究成果: Conference contribution

1 引用 (Scopus)

Operon structure optimization by random self-assembly

Nakagawa, Y., Yugi, K., Tsuge, K., Itaya, M., Yanagawa, H. & Sakakibara, Y., 2009 11 27, DNA Computing - 14th International Meeting on DNA Computing, DNA14, Revised Selected Papers. p. 33-40 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); 巻数 5347 LNCS).

研究成果: Conference contribution

2007

Stem kernels for RNA sequence analyses

Sakakibara, Y., Asai, K. & Sato, K., 2007, Bioinformatics Research and Development - First International Conference, BIRD 2007 Proceedings. Springer Verlag, p. 278-291 14 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); 巻数 4414 LNBI).

研究成果: Conference contribution

1 引用 (Scopus)
2006

Development of an in vivo computer based on Escherichia coli

Nakagawa, H., Sakamoto, K. & Sakakibara, Y., 2006 7 13, DNA Computing - 11th International Workshop on DNA Computing, DNA11, Revised Selected Papers. p. 203-212 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); 巻数 3892 LNCS).

研究成果: Conference contribution

12 引用 (Scopus)

Discriminative detection of cis-acting regulatory variation from location data

Kawada, Y. & Sakakibara, Y., 2006 12 1, Proceedings of the 4th Asia-Pacific Bioinformatics Conference, APBC 2006. p. 89-98 10 p. (Series on Advances in Bioinformatics and Computational Biology; 巻数 3).

研究成果: Conference contribution

1 引用 (Scopus)

Intensive in vitro experiments of implementing and executing finite automata in test tube

Kuramochi, J. & Sakakibara, Y., 2006 7 13, DNA Computing - 11th International Workshop on DNA Computing, DNA11, Revised Selected Papers. p. 193-202 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); 巻数 3892 LNCS).

研究成果: Conference contribution

5 引用 (Scopus)
2005

Discriminative discovery of transcription factor binding sites from location data

Kawada, Y. & Sakakibara, Y., 2005 12 1, Proceedings - 2005 IEEE Computational SystemsBioinformatics Conference, CSB 2005. p. 86-92 7 p. 1498010. (Proceedings - 2005 IEEE Computational Systems Bioinformatics Conference, CSB 2005; 巻数 2005).

研究成果: Conference contribution

1 引用 (Scopus)
2004

Grammatical inference: Algorithms and applications: 7th international colloquium, ICGI 2004 Athens, Greece, october 11-13, 2004 proceedings

Paliouras, G. & Sakakibara, Y., 2004, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Springer Verlag, 巻 3264. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); 巻数 3264).

研究成果: Conference contribution

Pair stochastic tree adjoining grammars for aligning and predicting pseudoknot RNA structures

Matsui, H., Sato, K. & Sakakibara, Y., 2004 1 1, Proceedings - 2004 IEEE Computational Systems Bioinformatics Conference, CSB 2004. IEEE Computer Society, p. 290-299 10 p. (Proceedings - 2004 IEEE Computational Systems Bioinformatics Conference, CSB 2004).

研究成果: Conference contribution

5 引用 (Scopus)
2002

Population computation and majority inference in test tube

Sakakibara, Y., 2002, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Springer Verlag, 巻 2340. p. 82-91 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); 巻数 2340).

研究成果: Conference contribution

1 引用 (Scopus)
2001

Solving computational learning problems of boolean formulae on DNA computers

Sakakibara, Y., 2001 1 1, DNA Computing - 6th International Workshop on DNA-Based Computers, DNA 2000 Leiden, The Netherlands, June 13-17, 2000 Revised Papers. Rozenberg, G. & Condon, A. (版). Springer Verlag, p. 220-230 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); 巻数 2054).

研究成果: Conference contribution

4 引用 (Scopus)
2000

Learning context-free grammars from partially structured examples

Sakakibara, Y. & Muramatsu, H., 2000, Grammatical Inference: Algorithms and Applications - 5th International Colloquium, ICGI 2000, Proceedings. Springer Verlag, 巻 1891. p. 229-240 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); 巻数 1891).

研究成果: Conference contribution

30 引用 (Scopus)
1996

Stochastic simple recurrent neural networks

Golea, M., Matsuoka, M. & Sakakibara, Y., 1996, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Springer Verlag, 巻 1147. p. 262-273 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); 巻数 1147).

研究成果: Conference contribution

1995

Grammatical inference: An old and new paradigm

Sakakibara, Y., 1995 1 1, Algorithmic Learning Theory - 6th International Workshop, ALT 1995, Proceedings. Jantke, K. P., Zeugmann, T. & Shinohara, T. (版). Springer Verlag, p. 1-24 24 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); 巻数 997).

研究成果: Conference contribution

2 引用 (Scopus)

Stochastic context-free grammars for modeling RNA

Sakakibara, Y., Brown, M., Underwood, R. C., Mian, I. S. & Haussler, D., 1995 1 1, Proceedings of the Hawaii International Conference on System Sciences. Nunamaker, J. F. & Sprague, R. H. J. (版). Publ by IEEE, p. 284-293 10 p. (Proceedings of the Hawaii International Conference on System Sciences; 巻数 5).

研究成果: Conference contribution

32 引用 (Scopus)
1994

Learning languages by collecting cases and tuning parameters

Sakakibara, Y., Jantke, K. P. & Lange, S., 1994, Algorithmic Learning Theory - 4th International Workshop on Analogical and Inductive Inference, AII 1994 and 5th International Workshop on Algorithmic Learning Theory, ALT 1994, Proceedings. Arikawa, S. & Jantke, K. P. (版). Springer Verlag, p. 532-546 15 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); 巻数 872 LNAI).

研究成果: Conference contribution

4 引用 (Scopus)

Recent methods for rna modeling using stochastic context-free grammars

Sakakibara, Y., Brown, M., Hughey, R., Mian, S., Sjölander, K., Underwood, R. C. & Haussler, D., 1994 1 1, Combinatorial Pattern Matching - 5th Annual Symposium, CPM 1994, Proceedings. Crochemore, M. & Gusfield, D. (版). Springer Verlag, p. 290-306 17 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); 巻数 807 LNCS).

研究成果: Conference contribution

16 引用 (Scopus)
1993

Text classification and keyword extraction by learning decision trees

Sakakibara, Y., Misue, K. & Koshiba, T., 1993 1 1, Proceedings of the Conference on Artificial Intelligence Applications. Publ by IEEE, 1 p. (Proceedings of the Conference on Artificial Intelligence Applications).

研究成果: Conference contribution

8 引用 (Scopus)
1992

Noise model on learning sets of strings

Sakakibara, Y. & Siromoney, R., 1992 12 1, Proceedings of the Fifth Annual ACM Workshop on Computational Learning Theory. Publ by ACM, p. 295-302 8 p. (Proceedings of the Fifth Annual ACM Workshop on Computational Learning Theory).

研究成果: Conference contribution

15 引用 (Scopus)
1987

Programming in modal logic: An extension of PROLOG based on modal logic

Sakakibara, Y., 1987 1 1, Logic Programming 1986 - Proceedings of the 5th Conference. Wada, E. (版). Springer Verlag, p. 81-91 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); 巻数 264 LNCS).

研究成果: Conference contribution

6 引用 (Scopus)